RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SNAP29O95721 258 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MYBL1P10243 752 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 POU3F2P20265 443 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HOXA5P20719 270 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PRCPP42785 496 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CCR10P46092 362 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 EIF2B2P49770 351 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NKX2-5P52952 324 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PPP5CP53041 499 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SLURP1P55000 103 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 RAB4BP61018 213 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HNRNPKP61978 463 aaKnown RBP eCLIP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 YWHAEP62258 255 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FADDQ13158 208 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ADIPOQQ15848 244 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP2A13Q16696 494 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PHKG1Q16816 387 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PFKFB4Q16877 469 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CTXN3Q4LDR2 81 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF385BQ569K4 471 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BMP2KLQ5H9B9 411 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BRMS1LQ5PSV4 323 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HES5Q5TA89 166 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 RNF220Q5VTB9 566 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TAF2Q6P1X5 1199 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 STOX1Q6ZVD7 989 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 USP43Q70EL4 1123 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TRMT10CQ7L0Y3 403 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PEX26Q7Z412 305 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 RABEPKQ7Z6M1 372 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 COL23A1Q86Y22 540 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CPOQ8IVL8 374 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 VSTM4Q8IW00 320 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BBS7Q8IWZ6 715 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FANCBQ8NB91 859 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GSTCDQ8NEC7 633 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TRPV3Q8NET8 790 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CHTF18Q8WVB6 975 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CPT1BQ92523 772 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CELF1Q92879 486 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MTFMTQ96DP5 389 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TOE1Q96GM8 510 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TEKT5Q96M29 485 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GDAP1L1Q96MZ0 367 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GNRHR2Q96P88 292 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 EFHD1Q9BUP0 239 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BDH2Q9BUT1 245 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FBRSL1Q9HCM7 1045 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DIABLOQ9NR28 239 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 C20orf96Q9NUD7 363 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 VPS54Q9P1Q0 977 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 IPO11Q9UI26 975 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHA7Q9UN72 937 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NAALADL1Q9UQQ1 740 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 VWA7Q9Y334 891 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SAMHD1Q9Y3Z3 626 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GRIN2DO15399 1336 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 POM121BA6NF01 834 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF98A6NK75 572 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 A8MXE2 369 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 AHRRA9YTQ3 701 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 KBTBD13C9JR72 458 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 F5H0A9 414 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DCLK1O15075 740 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OGTO15294 1046 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CLOCKO15516 846 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CA12O43570 354 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HCRTR2O43614 444 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 B4GALT3O60512 393 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PHF2O75151 1096 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PTP4A3O75365 173 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NDUFS6O75380 124 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 JRKO75564 520 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GCATO75600 419 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 BCAS2O75934 225 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PRAMEF12O95522 483 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OTCP00480 354 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CSTAP01040 98 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FHP07954 510 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TMIGD3P0DMS9 266 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MLNP12872 115 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GNSP15586 552 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CKMT2P17540 419 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PDCP20941 246 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC7A1P30825 629 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC5A2P31639 672 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CNR2P34972 360 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ADRA1BP35368 520 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GSTM5P46439 218 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ERFP50548 548 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CCR9P51686 369 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HNRNPFP52597 415 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CDH6P55285 790 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 AP1S2P56377 157 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TAS2R40P59535 323 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 RAC3P60763 192 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SUMO1P63165 101 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ECT2LQ008S8 904 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GLO1Q04760 184 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms