RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 MAPK4P31152 587 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 ABCD1P33897 745 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 RPL3P39023 403 aaKnown RBP3.41□□□□□ -1.86
VPS36-205ENST00000492650 PNLIPRP1P54315 467 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 PRKAA2P54646 552 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 DDR1Q08345 913 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 CTXN3Q4LDR2 81 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 RHBDF2Q6PJF5 856 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 FAM47EQ6ZV65 393 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 RASGRP2Q7LDG7 609 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 CATSPER4Q7RTX7 472 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 R3HCC1LQ7Z5L2 792 aaKnown RBP3.41□□□□□ -1.86
VPS36-205ENST00000492650 SDCCAG8Q86SQ7 713 aaPredicted RBP3.41□□□□□ -1.86
VPS36-205ENST00000492650 AVL9Q8NBF6 648 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 SPATA20Q8TB22 786 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 GPT2Q8TD30 523 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 TMEM255BQ8WV15 326 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 HES6Q96HZ4 224 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 IL17FQ96PD4 163 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 EYA3Q99504 573 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 EDEM3Q9BZQ6 932 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 TWSG1Q9GZX9 223 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 ABCG4Q9H172 646 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 SIL1Q9H173 461 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 OR10A4Q9H209 315 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 TSPY26PQ9H489 355 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 SYNCQ9H7C4 482 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 TRPV4Q9HBA0 871 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 EIF2B3Q9NR50 452 aaKnown RBP3.41□□□□□ -1.86
VPS36-205ENST00000492650 PDRG1Q9NUG6 133 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 THAP1Q9NVV9 213 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 WDR35Q9P2L0 1181 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 RPS6KA6Q9UK32 745 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 KNSTRNQ9Y448 316 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 CYP46A1Q9Y6A2 500 aa3.41□□□□□ -1.86
VPS36-205ENST00000492650 A0A0U1RQJ8 604 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 OR6C68A6NDL8 312 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 PRR23AA6NEV1 266 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TRIM64CA6NLI5 447 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TSPAN9O75954 239 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TGDSO95455 350 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 CH25HO95992 272 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 CGAP01215 116 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 IL1AP01583 271 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 SP1P08047 785 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 ACP5P13686 325 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 ARSAP15289 507 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 STMN1P16949 149 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 RXRAP19793 462 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 ATP5DP30049 168 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 AARSP49588 968 aaKnown RBP eCLIP3.4□□□□□ -1.87
VPS36-205ENST00000492650 CREB5Q02930 508 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.4□□□□□ -1.87
VPS36-205ENST00000492650 PTPN14Q15678 1187 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 BAK1Q16611 211 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 AP5B1Q2VPB7 878 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TBC1D9BQ66K14 1250 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 NAA16Q6N069 864 aaPredicted RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 TATDN1Q6P1N9 297 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 SYT13Q7L8C5 426 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 DNAJB7Q7Z6W7 309 aaPredicted RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 ARMC8Q8IUR7 673 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 EPHX4Q8IUS5 362 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 PGBD5Q8N414 524 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 ANKRD44Q8N8A2 993 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 NAT8LQ8N9F0 302 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 OR6Y1Q8NGX8 325 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 RASSF8Q8NHQ8 419 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 GOT1L1Q8NHS2 421 aaPredicted RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 NEK9Q8TD19 979 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 RNF125Q96EQ8 232 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 BICD1Q96G01 975 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 WBP1Q96G27 269 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 FEM1CQ96JP0 617 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 GPATCH1Q9BRR8 931 aaKnown RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 MXD3Q9BW11 206 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TAF1DQ9H5J8 278 aaPredicted RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 GAREM1Q9H706 876 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 CLK4Q9HAZ1 481 aaKnown RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 XAB2Q9HCS7 855 aaKnown RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 CCDC177Q9NQR7 707 aaPredicted RBP3.4□□□□□ -1.87
VPS36-205ENST00000492650 GRHL1Q9NZI5 618 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 PCDHGB4Q9UN71 923 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 TMEM5Q9Y2B1 443 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 PAM16Q9Y3D7 125 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 NFS1Q9Y697 457 aa3.4□□□□□ -1.87
VPS36-205ENST00000492650 MAGEA13PA6NCF6 341 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 FAM157AC9JC47 383 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 H0Y626 953 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 RTCAO00442 366 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 NTN3O00634 580 aaPredicted RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 SLC7A4O43246 635 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 LMX1BO60663 402 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 ERAL1O75616 437 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 KRT38O76015 456 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 PGM3O95394 542 aa3.39□□□□□ -1.87
VPS36-205ENST00000492650 AFPP02771 609 aaKnown RBP3.39□□□□□ -1.87
VPS36-205ENST00000492650 CNPP09543 421 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms