RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TFAP2DQ7Z6R9 452 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 CCDC117Q8IWD4 279 aaPredicted RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 APCDD1Q8J025 514 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 UMODL1-AS1Q8N2C9 162 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 ZNF557Q8N988 423 aaPredicted RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 BBOF1Q8ND07 529 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 CCDC110Q8TBZ0 833 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 EPS8L3Q8TE67 593 aaKnown RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 NANOS1Q8WY41 292 aaKnown RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 SNX19Q92543 992 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 HDAC11Q96DB2 347 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 MRGPRX3Q96LB0 322 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 NSUN5Q96P11 429 aaKnown RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 TSGA13Q96PP4 275 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 FMO2Q99518 471 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 TXLNGYQ9BZA5 131 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 ZDHHC5Q9C0B5 715 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 BTBD1Q9H0C5 482 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 GAREM1Q9H706 876 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 PAK5Q9P286 719 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 SLCO3A1Q9UIG8 710 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 ANAPC5Q9UJX4 755 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 TPX2Q9ULW0 747 aaKnown RBP7.65□□□□□ -1.18
CLDN1-202ENST00000490800 ERVW-1Q9UQF0 538 aa7.65□□□□□ -1.18
CLDN1-202ENST00000490800 KMT2BQ9UMN6 2715 aaPredicted RBP7.65□□□□□ -1.19
CLDN1-202ENST00000490800 ASCC3Q8N3C0 2202 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SHROOM3Q8TF72 1996 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ADAMTS9Q9P2N4 1935 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TNRC6BQ9UPQ9 1833 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ASPMQ8IZT6 3477 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TCRBV7S3A2A0A539 114 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TTC34A8MYJ7 566 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RASA4BC9J798 803 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 KCNK1O00180 336 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RNF103O00237 685 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MAP2K7O14733 419 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RASA4O43374 803 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MAFKO60675 156 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PPFIA2O75334 1257 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ZNF189O75820 626 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 FSBPO95073 299 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 LUC7L3O95232 432 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SEMA4FO95754 770 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ASLP04424 464 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PTPN3P26045 913 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 HSPA9P38646 679 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MAGEA6P43360 314 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 NUMBP49757 651 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PAPOLAP51003 745 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 NDST2P52849 883 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 CDH4P55283 916 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ECT2LQ008S8 904 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ZBTB16Q05516 673 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 CDH18Q13634 790 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 HNRNPDQ14103 355 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 KCNJ11Q14654 390 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MORF4L2Q15014 288 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 HNRNPA1L2Q32P51 320 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PITRM1Q5JRX3 1037 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RABGAP1LQ5R372 815 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ANKRD20A2Q5SQ80 823 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 FAXCQ5TGI0 409 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ANKRD20A1Q5TYW2 823 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ANKRD20A3Q5VUR7 823 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ANKRD22Q5VYY1 191 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ZNF776Q68DI1 518 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 C4orf22Q6V702 233 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TMC3Q7Z5M5 1100 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 LRRC49Q8IUZ0 686 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PPIL6Q8IXY8 311 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 CCDC13Q8IYE1 715 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ZNF567Q8N184 647 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 CHCHD4Q8N4Q1 142 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MREGQ8N565 214 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 TAB3Q8N5C8 712 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 ATPAF2Q8N5M1 289 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 PNPLA1Q8N8W4 532 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 NAT8LQ8N9F0 302 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 OR13H1Q8NG92 308 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 GANCQ8TET4 914 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SETD7Q8WTS6 366 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 CPT1BQ92523 772 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 BIRC7Q96CA5 298 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 HMCESQ96FZ2 354 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RPL10LQ96L21 214 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SPATA13Q96N96 652 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 FUT8Q9BYC5 575 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RSPH9Q9H1X1 276 aaPredicted RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 RETREG1Q9H6L5 497 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 FBXL12Q9NXK8 326 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 DONSONQ9NYP3 566 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SEPT10Q9P0V9 454 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 VTI1BQ9UEU0 232 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 MTRF1LQ9UGC7 380 aaKnown RBP7.64□□□□□ -1.19
CLDN1-202ENST00000490800 KLK13Q9UKR3 277 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 SHOC2Q9UQ13 582 aa7.64□□□□□ -1.19
CLDN1-202ENST00000490800 NCKAP1Q9Y2A7 1128 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms