RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 DDI1Q8WTU0 396 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 KLHL5Q96PQ7 755 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CDCA3Q99618 268 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MRPL57Q9BQC6 102 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 GORASP1Q9BQQ3 440 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 VN1R3Q9BXE9 311 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CEP41Q9BYV8 373 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CEP44Q9C0F1 390 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CDH19Q9H159 772 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MRPL46Q9H2W6 279 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TASP1Q9H6P5 420 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SLC28A3Q9HAS3 691 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 NMRAL1Q9HBL8 299 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 EML4Q9HC35 981 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 CD320Q9NPF0 282 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 IARS2Q9NSE4 1012 aaKnown RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 NCKIPSDQ9NZQ3 722 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 VPS28Q9UK41 221 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 APPL1Q9UKG1 709 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 TRIM33Q9UPN9 1127 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 PKP3Q9Y446 797 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 SNX10Q9Y5X0 201 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 BDP1A6H8Y1 2624 aa6.39□□□□□ -1.39
SF3A3-208ENST00000489537 FNDC1Q4ZHG4 1894 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-208ENST00000489537 ATG2AQ2TAZ0 1938 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 FAM95CA0A1B0GW59 222 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 LINC01553A4QN01 128 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 C2orf71A6NGG8 1288 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 H3BNC9 293 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 H7C0S8 307 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 GOLGA8RI6L899 631 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 J3KR12 359 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CBX4O00257 560 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC22A2O15244 555 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 GRM6O15303 877 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TBL1XO60907 577 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 USP12O75317 370 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SOAT2O75908 522 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 KLHL2O95198 593 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 IGSF6O95976 241 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 GSRP00390 522 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 C2P06681 752 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 LTA4HP09960 611 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 RALBP11234 206 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CREB1P16220 341 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 LPOP22079 712 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 NMBRP28336 390 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 HOXD9P28356 352 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SERPINA4P29622 427 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ADSLP30566 484 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SLC6A4P31645 630 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PGFP49763 221 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 SCNN1BP51168 640 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CLCN4P51793 760 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 EPHB1P54762 984 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ADARP55265 1226 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 RHOAP61586 193 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CRADDP78560 199 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 GALNT1Q10472 559 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PDE1CQ14123 709 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 KRT72Q14CN4 511 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ACAP2Q15057 778 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TLR1Q15399 786 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CNGA3Q16281 694 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 FASTKD1Q53R41 847 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CFAP157Q5JU67 520 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 UBAP2Q5T6F2 1119 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ARMC12Q5T9G4 340 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 N4BP2L1Q5TBK1 243 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 RNF219Q5W0B1 726 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF470Q6ECI4 717 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 LRRC8EQ6NSJ5 796 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ARHGAP36Q6ZRI8 547 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 OTOAQ7RTW8 1153 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PIWIL4Q7Z3Z4 852 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 RAB44Q7Z6P3 723 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CLEC14AQ86T13 490 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CMTM8Q8IZV2 173 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CARNMT1Q8N4J0 409 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 NKAPQ8N5F7 415 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CCDC33Q8N5R6 958 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PCDH20Q8N6Y1 951 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 PAF1Q8N7H5 531 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TDRD5Q8NAT2 981 aaKnown RBP6.38□□□□□ -1.39
SF3A3-208ENST00000489537 OR6P1Q8NGX9 317 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 CFAP61Q8NHU2 1237 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 HCAR2Q8TDS4 363 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 MICAL1Q8TDZ2 1067 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 WFIKKN2Q8TEU8 576 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 HEXDCQ8WVB3 486 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 INPP5DQ92835 1189 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 ZBTB9Q96C00 473 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 RMDN1Q96DB5 314 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 LRIG1Q96JA1 1093 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TMEM237Q96Q45 408 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 TCF25Q9BQ70 676 aa6.38□□□□□ -1.39
SF3A3-208ENST00000489537 C17orf80Q9BSJ5 609 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms