RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 LBHD1Q9BQE6 289 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 NUDT16L1Q9BRJ7 211 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 USP44Q9H0E7 712 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMX4Q9H1E5 349 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 PLAC1Q9HBJ0 212 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 HAUS2Q9NVX0 235 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 VPS28Q9UK41 221 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 MYO6Q9UM54 1294 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 PSAT1Q9Y617 370 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 SNAP23O00161 211 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 TNFRSF13BO14836 293 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SCAMP1O15126 338 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 LDB2O43679 373 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 GPC4O75487 556 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SERPINI2O75830 405 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 IGKV3-20P01619 116 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 FGF2P09038 288 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 ACTN1P12814 892 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 PBX3P40426 434 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 PIP4K2AP48426 406 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 EFNA5P52803 228 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 ADORA2A-AS1P86434 159 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 NAE1Q13564 534 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 MED22Q15528 200 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 NAB2Q15742 525 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SOWAHAQ2M3V2 549 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 RILPL1Q5EBL4 403 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SNX30Q5VWJ9 437 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 GGNBP1Q5YKI7 109 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SHFQ7M4L6 423 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 CACNA2D4Q7Z3S7 1137 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMPRSS12Q86WS5 348 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZBTB2Q8N680 514 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 USP6NLQ92738 828 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 INPP5DQ92835 1189 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 MTBPQ96DY7 904 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 TXNDC15Q96J42 360 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 FAM84BQ96KN1 310 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 LRFN5Q96NI6 719 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 BARD1Q99728 777 aaKnown RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 SH3GL2Q99962 352 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 FTOQ9C0B1 505 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 CCDC68Q9H2F9 335 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 PLEKHA4Q9H4M7 779 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 MAP3K20Q9NYL2 800 aaKnown RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 OR6C3Q9NZP0 311 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 FBXO9Q9UK97 447 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 RCOR1Q9UKL0 485 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 CORO1CQ9ULV4 474 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 CAPN7Q9Y6W3 813 aa3.84□□□□□ -1.79
HMGB1P36-201ENST00000487709 TCF20Q9UGU0 1960 aaKnown RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 A0A1B0GVM2 712 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 TMEM202A6NGA9 273 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 PTGES3LE9PB15 166 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 K7ENM7 598 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 PRSS2P07478 247 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 AGAP20933 346 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 RRM1P23921 792 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 PEX5P50542 639 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 F2RL1P55085 397 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 ECT2LQ008S8 904 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 CHAF1BQ13112 559 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 AIMP2Q13155 320 aaKnown RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 WTAPQ15007 396 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 ADIPOQQ15848 244 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 ZNF367Q7RTV3 350 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 FOXP4Q8IVH2 680 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 TAGAPQ8N103 731 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 TTC39CQ8N584 583 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 SNAPC3Q92966 411 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 MMABQ96EY8 250 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 PGAM5Q96HS1 289 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 CMTM3Q96MX0 182 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 MEIS3Q99687 375 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 FAM110AQ9BQ89 295 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 KXD1Q9BQD3 176 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 C1QTNF1Q9BXJ1 281 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 GPR108Q9NPR9 543 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 SEPT11Q9NVA2 429 aaKnown RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 SLCO3A1Q9UIG8 710 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 TTC7AQ9ULT0 858 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 TMEM5Q9Y2B1 443 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 RABGAP1Q9Y3P9 1069 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 PIAS3Q9Y6X2 628 aa3.83□□□□□ -1.8
HMGB1P36-201ENST00000487709 ATXN2Q99700 1313 aaKnown RBP3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 HCRTR2O43614 444 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 HS6ST1O60243 411 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 KCNJ13O60928 360 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 NKX2-2O95096 273 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 VNN2O95498 520 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 CH25HO95992 272 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 HOXB2P14652 356 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 ITGAXP20702 1163 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 EDN2P20800 178 aa3.82□□□□□ -1.8
HMGB1P36-201ENST00000487709 HOXC9P31274 260 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms