RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TCEA2Q15560 299 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PLEKHG4Q58EX7 1191 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZBTB49Q6ZSB9 765 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 CNTD1Q8N815 330 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 FAM162AQ96A26 154 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MED8Q96G25 268 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 TBCDQ9BTW9 1192 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 WDR6Q9NNW5 1121 aaKnown RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PNPLA8Q9NP80 782 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ARL15Q9NXU5 204 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 LRCH1Q9Y2L9 728 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MAGEA13PA6NCF6 341 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SEC22BO75396 215 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SLC18A1P54219 525 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SIRPB2Q5JXA9 342 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 TBCELQ5QJ74 424 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PLPP4Q5VZY2 271 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 AFTPHQ6ULP2 937 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 TREML1Q86YW5 311 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 FAM126BQ8IXS8 530 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 JADE3Q92613 823 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 CENPIQ92674 756 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 IGSF8Q969P0 613 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PCDHGB4Q9UN71 923 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF839A8K0R7 811 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 GABRDO14764 452 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 RAD51BO15315 384 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 GJB5O95377 273 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 NDST2P52849 883 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 PCLAFQ15004 111 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 TSNQ15631 228 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 AMIGO2Q86SJ2 522 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 CATSPER1Q8NEC5 780 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 SLC25A23Q9BV35 468 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 WDR70Q9NW82 654 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 EIF3LQ9Y262 564 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 NME7Q9Y5B8 376 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 AZIN1O14977 448 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 CCL16O15467 120 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 TM7SF2O76062 418 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 SNRPB2P08579 225 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 LBPP18428 481 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 PSMA4P25789 261 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 GRIA3P42263 894 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 TTPAP49638 278 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 IL10RBQ08334 325 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 RIPK1Q13546 671 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 FRG1Q14331 258 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 STARD3Q14849 445 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 PITRM1Q5JRX3 1037 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 EFL1Q7Z2Z2 1120 aaKnown RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ENPP3O14638 875 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 DLX3O60479 287 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 GTF2H3Q13889 308 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 DHFR2Q86XF0 187 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 MMADHCQ9H3L0 296 aaPredicted RBP13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ASAH2Q9NR71 780 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 SPG21Q9NZD8 308 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF212Q9UDV6 495 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 ACTL7AQ9Y615 435 aa13.24□□□□□ -0.29
HMGN1-216ENST00000486741 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 INSIG1O15503 277 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 UGT2B4P06133 528 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 C11orf96Q7Z7L8 435 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CAMK1DQ8IU85 385 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 HJURPQ8NCD3 748 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 SPASTQ9UBP0 616 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 A0A1B0GVM2 712 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 TCAF2A6NFQ2 919 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 GABBR2O75899 941 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CD68P34810 354 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 SLC7A2P52569 658 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 KRT72Q14CN4 511 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CRY1Q16526 586 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CGB2Q6NT52 195 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 DNAJB7Q7Z6W7 309 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CPNE9Q8IYJ1 553 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 DSELQ8IZU8 1212 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 SLAIN1Q8ND83 568 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 PARVBQ9HBI1 364 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 ZDHHC2Q9UIJ5 367 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 GJD2Q9UKL4 321 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 SCML2Q9UQR0 700 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms