RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ZFP36L1Q07352 338 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 EIF2B5Q13144 721 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CDH18Q13634 790 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ANKRD1Q15327 319 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 TCEA2Q15560 299 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 PPP2R5EQ16537 467 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ZXDCQ2QGD7 858 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF667Q5HYK9 610 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 TPRG1LQ5T0D9 272 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 MPP7Q5T2T1 576 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 PHF19Q5T6S3 580 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 PIP5KL1Q5T9C9 394 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ATP1A1-AS1Q5TC04 95 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 TCTN3Q6NUS6 607 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 HORMAD1Q86X24 394 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 DCP2Q8IU60 420 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 RP1L1Q8IWN7 2480 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CCDC13Q8IYE1 715 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CACNA2D3Q8IZS8 1091 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 APCDD1Q8J025 514 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 MMP21Q8N119 569 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 SLC34A3Q8N130 599 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CRYBG2Q8N1P7 616 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 KYQ8NBH2 561 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 FBXO18Q8NFZ0 1043 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 MZB1Q8WU39 189 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 OR8D1Q8WZ84 308 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 NDRG1Q92597 394 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 RAD54LQ92698 747 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CYFIP2Q96F07 1278 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 PNPLA8Q9NP80 782 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 GPR27Q9NS67 375 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 FBLN5Q9UBX5 448 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 APEX2Q9UBZ4 518 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 APOBEC3BQ9UH17 382 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 STOML2Q9UJZ1 356 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ZFR2Q9UPR6 939 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 MED13LQ71F56 2210 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 C1QTNF3-AMACRE9PGA6 284 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 LMO7DNF2Z398 122 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 MKRN2OSH3BPM6 223 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 KIAA0391O15091 583 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 RAD51BO15315 384 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 STX6O43752 255 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 MOCS3O95396 460 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 LATS1O95835 1130 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 PAK4O96013 591 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 TSHRP16473 764 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF18P17022 549 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 TACR1P25103 407 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 NNMTP40261 264 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 RABIFP47224 123 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 RPS24P62847 133 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 BIRC3Q13489 604 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 PTK2BQ14289 1009 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 C16orf72Q14CZ0 275 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 SNRNP35Q16560 246 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 DPY19L1Q2PZI1 675 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF699Q32M78 642 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ACCSLQ4AC99 568 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF385BQ569K4 471 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 FAM133BQ5BKY9 247 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 NEK5Q6P3R8 708 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 VHLLQ6RSH7 139 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 KYAT3Q6YP21 454 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 CCDC117Q8IWD4 279 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 MCEMP1Q8IX19 187 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 UNC5BQ8IZJ1 945 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 CFAP52Q8N1V2 620 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ARHGAP18Q8N392 663 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ARHGEF39Q8N4T4 335 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ARL10Q8N8L6 244 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF557Q8N988 423 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 FRS2Q8WU20 508 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 CPLX3Q8WVH0 158 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 BTN2A2Q8WVV5 523 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 LARP4BQ92615 738 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 DACT3Q96B18 629 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 MYEOVQ96EZ4 313 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 SLC45A3Q96JT2 553 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 C5orf34Q96MH7 638 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 PRICKLE1Q96MT3 831 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 TAAR9Q96RI9 348 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 TWNKQ96RR1 684 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 LRRC61Q9BV99 259 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 FGFBP2Q9BYJ0 223 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 SLC17A9Q9BYT1 436 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 SLC13A1Q9BZW2 595 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 CLPBQ9H078 707 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 CDH19Q9H159 772 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 GPN2Q9H9Y4 310 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 AKAP7Q9P0M2 348 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 KCND3Q9UK17 655 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 HBS1LQ9Y450 684 aaKnown RBP5.43□□□□□ -1.54
PTPN4-210ENST00000485247 HS3ST3A1Q9Y663 406 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 NAV3Q8IVL0 2385 aa5.43□□□□□ -1.54
PTPN4-210ENST00000485247 SVILO95425 2214 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 PDZD2O15018 2839 aa5.42□□□□□ -1.54
PTPN4-210ENST00000485247 CELSR1Q9NYQ6 3014 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms