RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 CYTH1Q15438 398 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 DENND2CQ68D51 928 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 DPY19L2P1Q6NXN4 242 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 TMPRSS9Q7Z410 1059 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 PTRH1Q86Y79 214 aaKnown RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 CAMK1DQ8IU85 385 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 RCBTB1Q8NDN9 531 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 CCL4L1Q8NHW4 92 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 HTR3CQ8WXA8 447 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 FUBP1Q96AE4 644 aaKnown RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 CELF6Q96J87 481 aaKnown RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 CINPQ9BW66 212 aaPredicted RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 NAA15Q9BXJ9 866 aaKnown RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 ATP13A3Q9H7F0 1226 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 GOLGA6AQ9NYA3 693 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 TAB2Q9NYJ8 693 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 ADAM22Q9P0K1 906 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 NOCTQ9UK39 431 aaKnown RBP10.35□□□□□ -0.75
DDX39B-220ENST00000482195 APPL1Q9UKG1 709 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
DDX39B-220ENST00000482195 PRSS38A1L453 326 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 J3KR12 359 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 FGF10O15520 208 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 SUV39H1O43463 412 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 NUDT21O43809 227 aaKnown RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 RECQL5O94762 991 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 CYP1A1P04798 512 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 CALB1P05937 261 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 CCL4P13236 92 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 DESP17661 470 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ITGB6P18564 788 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 RFC1P35251 1148 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 SCTRP47872 440 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 KLK7P49862 253 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 YBEYP58557 167 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 RAB15P59190 212 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 POLR2FP61218 127 aaKnown RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ZFP36L1Q07352 338 aaKnown RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 BCL2L1Q07817 233 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.753e-12■□□□□ 11.2
DDX39B-220ENST00000482195 CLCA4Q14CN2 919 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 COLEC12Q5KU26 742 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 DNAJC24Q6P3W2 148 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 TRIM72Q6ZMU5 477 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 PIM3Q86V86 326 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ZSWIM9Q86XI8 627 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 HCAR2Q8TDS4 363 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ZDHHC1Q8WTX9 485 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 CCDC74BQ96LY2 380 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 MCEEQ96PE7 176 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 TUBGCP5Q96RT8 1024 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 NUDT22Q9BRQ3 303 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 FUCA2Q9BTY2 467 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 SLC25A18Q9H1K4 315 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 CARS2Q9HA77 564 aaKnown RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 SP110Q9HB58 689 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 NLRC4Q9NPP4 1024 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 FAM207AQ9NSI2 230 aaPredicted RBP10.34□□□□□ -0.75
DDX39B-220ENST00000482195 GPATCH2LQ9NWQ4 482 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 SEPT3Q9UH03 358 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 DACH1Q9UI36 760 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 LRRK2Q5S007 2527 aa10.34□□□□□ -0.75
DDX39B-220ENST00000482195 ARHGAP42A6NI28 874 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 SOWAHDA6NJG2 315 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 DFFAO00273 331 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 ZW10O43264 779 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 BUB1BO60566 1050 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-220ENST00000482195 PALMO75781 387 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 CPNE6O95741 557 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 TPM2P07951 284 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 PNLIPP16233 465 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 CHRNB2P17787 502 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 SOX5P35711 763 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 GNPDA1P46926 289 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 RGRP47804 291 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 ILF3Q12906 894 aaKnown RBP eCLIP10.33□□□□□ -0.761e-9■■■■□ 21
DDX39B-220ENST00000482195 RALGDSQ12967 914 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 DPCR1Q3MIW9 517 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 BORAQ6PGQ7 559 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 SLC30A9Q6PML9 568 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-220ENST00000482195 SRLQ86TD4 932 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 FAM129CQ86XR2 697 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 UMODL1-AS1Q8N2C9 162 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 C3orf20Q8ND61 904 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 CCDC112Q8NEF3 446 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 CENPIQ92674 756 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-220ENST00000482195 PMEPA1Q969W9 287 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 NUS1Q96E22 293 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 LGR4Q9BXB1 951 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 GSDMCQ9BYG8 508 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 GANQ9H2C0 597 aa10.33□□□□□ -0.76
DDX39B-220ENST00000482195 PHPT1Q9NRX4 125 aaPredicted RBP10.33□□□□□ -0.76
DDX39B-220ENST00000482195 SAMSN1Q9NSI8 373 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms