RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PXNP49023 591 aaPredicted RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 NEK2P51955 445 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 NEK3P51956 506 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 ITGA8P53708 1063 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 RPL26P61254 145 aaKnown RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 CDK16Q00536 496 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 CNTN1Q12860 1018 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 TRADDQ15628 312 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 TPSAB1Q15661 275 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 LRRC73Q5JTD7 316 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 SIRPB2Q5JXA9 342 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 PPP1R21Q6ZMI0 780 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 ERN2Q76MJ5 926 aaKnown RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 PARS2Q7L3T8 475 aaKnown RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 C1orf210Q8IVY1 113 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 DNAAF3Q8N9W5 541 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 HDAC8Q9BY41 377 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 NEUROG2Q9H2A3 272 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 WHRNQ9P202 907 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 ANAPC5Q9UJX4 755 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 RPL26L1Q9UNX3 145 aaKnown RBP11.63□□□□□ -0.55
HPS4-212ENST00000481910 NCKAP1Q9Y2A7 1128 aa11.63□□□□□ -0.55
HPS4-212ENST00000481910 TSPAN11A1L157 253 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 GOLGA8MH3BSY2 632 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 K7ESF4 209 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 PAPSS2O95340 614 aaPredicted RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 ATXN1LP0C7T5 689 aaKnown RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 C7P10643 843 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 ADRB3P13945 408 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 CTPS1P17812 591 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 P2RY2P41231 377 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 TPMTP51580 245 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 DRG2P55039 364 aaKnown RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 USP30Q70CQ3 517 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 KBTBD6Q86V97 674 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 HOOK3Q86VS8 718 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 RASSF3Q86WH2 238 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 NAT8LQ8N9F0 302 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 OR52K1Q8NGK4 314 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 ZFAND2BQ8WV99 257 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 UBXN4Q92575 508 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 TPSD1Q9BZJ3 242 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 ITM2CQ9NQX7 267 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 PIH1D1Q9NWS0 290 aaKnown RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 SERGEFQ9UGK8 458 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 EBF1Q9UH73 591 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 EME2A4GXA9 379 aaPredicted RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 A8MX80 341 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 UPK3BL1B0FP48 263 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 UPK3BL2E5RIL1 263 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 NDC80O14777 642 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 TMEM63AO94886 807 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 PRKCGP05129 697 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 FGF1P05230 155 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 ALPIP09923 528 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 NFKBIAP25963 317 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 GRIA4P48058 902 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 CSE1LP55060 971 aaKnown RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 CDH17Q12864 832 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 MORF4L2Q15014 288 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 QPCTQ16769 361 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 DENND5AQ6IQ26 1287 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 HIBCHQ6NVY1 386 aaPredicted RBP11.62□□□□□ -0.55
HPS4-212ENST00000481910 TSSK4Q6SA08 328 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 USP45Q70EL2 814 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 FAM124AQ86V42 546 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 MCUQ8NE86 351 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 LZICQ8WZA0 190 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 SCRN2Q96FV2 425 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 PHACTR1Q9C0D0 580 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 ARNT2Q9HBZ2 717 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 CD93Q9NPY3 652 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 PPIL1Q9Y3C6 166 aa11.62□□□□□ -0.55
HPS4-212ENST00000481910 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 NEMP1O14524 444 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 ZNF217O75362 1048 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 TRBC1P01850 177 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 PIRTP0C851 137 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 TPH1P17752 444 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 HNF1BP35680 557 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 RANBP1P43487 201 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 PLTPP55058 493 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 SEMG2Q02383 582 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 PTPRRQ15256 657 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 PIP5KL1Q5T9C9 394 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 AGBL4Q5VU57 503 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 ERAP2Q6P179 960 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 LRRC8BQ6P9F7 803 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 IFT81Q8WYA0 676 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 SEC14L1Q92503 715 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 RAB7BQ96AH8 199 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 SMIM14Q96QK8 99 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms