RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	NFIL3	Q16649	462 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	C2orf68	Q2NKX9	166 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ACCSL	Q4AC99	568 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	PPP6R3	Q5H9R7	873 aa	Predicted RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ATG16L1	Q676U5	607 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	PLA2G4F	Q68DD2	849 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	HIST2H2BD	Q6DRA6	164 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	RGMB	Q6NW40	437 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	FAM122C	Q6P4D5	195 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	KRBA2	Q6ZNG9	492 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	TDRP	Q86YL5	185 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZNF34	Q8IZ26	560 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	DSEL	Q8IZU8	1212 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZCCHC9	Q8N567	271 aa	Known RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	SPATA5	Q8NB90	893 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	SCCPDH	Q8NBX0	429 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	KCNH5	Q8NCM2	988 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	DMBX1	Q8NFW5	382 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	FBXL8	Q96CD0	374 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	LBHD1	Q9BQE6	289 aa	Predicted RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ESRP2	Q9H6T0	727 aa	Known RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZNF696	Q9H7X3	374 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	MAGEE1	Q9HCI5	957 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZNF334	Q9HCZ1	680 aa	Predicted RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	HSF4	Q9ULV5	492 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	FAM96B	Q9Y3D0	163 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	PCDHGB3	Q9Y5G1	929 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	COL2A1	P02458	1487 aa	Predicted RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	IGKV3D-15	A0A087WSY6	115 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TEX22	C9J3V5	150 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TACC1	O75410	805 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TCEA3	O75764	348 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	HEXA	P06865	529 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	GALT	P07902	379 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	MMP2	P08253	660 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	FGF5	P12034	268 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	ITGA2	P17301	1181 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	AGA	P20933	346 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TMPO	P42166	694 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	EFNA5	P52803	228 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	CDH15	P55291	814 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	EFNB1	P98172	346 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	PPP2R5B	Q15173	497 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	CTF1	Q16619	201 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	GPATCH4	Q5T3I0	446 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	CPLX2	Q6PUV4	134 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	C19orf48	Q6RUI8	117 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	GFRAL	Q6UXV0	394 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TMEM219	Q86XT9	240 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	CHERP	Q8IWX8	916 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC35F3	Q8IY50	421 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	NKAP	Q8N5F7	415 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TNIP2	Q8NFZ5	429 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	RPS6KC1	Q96S38	1066 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	BPIFA1	Q9NP55	256 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	RIC8A	Q9NPQ8	531 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	GPR108	Q9NPR9	543 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	ABCF3	Q9NUQ8	709 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	DDX43	Q9NXZ2	648 aa	Known RBP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	TAAR2	Q9P1P5	351 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	HSPB7	Q9UBY9	170 aa		3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	3.18	□□□□□ -1.9
CCNL1-223	ENST00000481173	ASPDH	A6ND91	283 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	CAPN9	O14815	690 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	MT-CYB	P00156	380 aa	Predicted RBP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	POU1F1	P28069	291 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	HOXC13	P31276	330 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	SHMT1	P34896	483 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	PGM1	P36871	562 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	FMO5	P49326	533 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	SEC61B	P60468	96 aa	Known RBP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	BIRC2	Q13490	618 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC45A4	Q5BKX6	768 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	KCNT1	Q5JUK3	1230 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	MAP3K21	Q5TCX8	1036 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	TMEM81	Q6P7N7	255 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	TAOK1	Q7L7X3	1001 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	TMTC1	Q8IUR5	882 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	CPO	Q8IVL8	374 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	WDR63	Q8IWG1	891 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	BEST2	Q8NFU1	509 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	ABTB1	Q969K4	478 aa	Predicted RBP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	CDCA5	Q96FF9	252 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZSCAN31	Q96LW9	406 aa	Predicted RBP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	PCYT2	Q99447	389 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	CMKLR1	Q99788	373 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	NDST4	Q9H3R1	872 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	FBXO9	Q9UK97	447 aa	Predicted RBP	3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	PADI1	Q9ULC6	663 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	STON1	Q9Y6Q2	735 aa		3.17	□□□□□ -1.9
CCNL1-223	ENST00000481173	TMEM202	A6NGA9	273 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	PIP5K1C	O60331	668 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	BAG4	O95429	457 aa	Known RBP	3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	S1PR1	P21453	382 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	TIMP3	P35625	211 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	GNL1	P36915	607 aa	Predicted RBP	3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	CCR5	P51681	352 aa		3.16	□□□□□ -1.9
CCNL1-223	ENST00000481173	ISL1	P61371	349 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms