RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ITGB1P05556 798 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CYP3A4P08684 503 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 POLR2MP0CAP2 368 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GLI4P10075 376 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KRT3P12035 628 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC130P13994 396 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NID1P14543 1247 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NCF1P14598 390 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PNLIPP16233 465 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ATP5JP18859 108 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 HK1P19367 917 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ITIH1P19827 911 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ACHEP22303 614 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GALP22466 123 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 MMP8P22894 467 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 JAK1P23458 1154 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 DNAJB1P25685 340 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PON1P27169 355 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RBL1P28749 1068 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 FMO4P31512 558 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CHRNA3P32297 505 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 THBS4P35443 961 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ALDH1A3P47895 512 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KRT6CP48668 564 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 DHPSP49366 369 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NDUFV1P49821 464 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GATMP50440 423 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CLCN7P51798 805 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RPS6KA3P51812 740 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PGDP52209 483 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 DGKEP52429 567 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PRKAG1P54619 331 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 EPHB4P54760 987 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NPEPPSP55786 919 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP8P85298 464 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ATP2C1P98194 919 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KRT76Q01546 638 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SPIBQ01892 262 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RELQ04864 619 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 DUSP2Q05923 314 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SPAG1Q07617 926 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 BNIP3Q12983 259 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SEMA3BQ13214 749 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CCNIQ14094 377 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GALNT3Q14435 633 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PGM5Q15124 567 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ZMYND11Q15326 602 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 NFKBIBQ15653 356 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SNAPC1Q16533 368 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 UGP2Q16851 508 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 AAK1Q2M2I8 961 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KRT71Q3SY84 523 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 AARDQ4LEZ3 155 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CBWD6Q4V339 395 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SOWAHCQ53LP3 525 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CRB2Q5IJ48 1285 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RALGPS1Q5JS13 557 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CBWD3Q5JTY5 395 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 TCTE1Q5JU00 501 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CFAP157Q5JU67 520 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SPOUT1Q5T280 376 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 AFMIDQ63HM1 303 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KANK2Q63ZY3 851 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP17Q68EM7 881 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ANKRD40Q6AI12 368 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 BICRALQ6AI39 1079 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 VASNQ6EMK4 673 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RAET1GQ6H3X3 334 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KIAA0930Q6ICG6 404 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ZCCHC12Q6PEW1 402 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 TSSK4Q6SA08 328 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 METAP1DQ6UB28 335 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 LRIG3Q6UXM1 1119 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 CHSY3Q70JA7 882 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 MARK2Q7KZI7 788 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 TRAPPC11Q7Z392 1133 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SYVN1Q86TM6 617 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 MCEMP1Q8IX19 187 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ELOA2Q8IYF1 753 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PM20D2Q8IYS1 436 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 ZCCHC7Q8N3Z6 543 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RASGEF1CQ8N431 466 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SIRT6Q8N6T7 355 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SPERTQ8NA61 448 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 KDM1BQ8NB78 822 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 SLC4A11Q8NBS3 891 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 LEMD2Q8NC56 503 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 BBOF1Q8ND07 529 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 OR52M1Q8NGK5 317 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 OR13C2Q8NGS9 318 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 EXOC6Q8TAG9 804 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 C9orf43Q8TAL5 461 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 MIPOL1Q8TD10 442 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 BPIFB1Q8TDL5 484 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 PSPC1Q8WXF1 523 aaKnown RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 RAB40AQ8WXH6 277 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 BCL2L2Q92843 193 aaPredicted RBP2.92□□□□□ -1.94
HMGN4-202ENST00000477243 GTF3C6Q969F1 213 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 MIB2Q96AX9 1013 aa2.92□□□□□ -1.94
HMGN4-202ENST00000477243 C11orf24Q96F05 449 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms