RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 JADE3Q92613 823 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
UBXN11-214ENST00000475591 MGME1Q9BQP7 344 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 CATSPERZQ9NTU4 200 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 STK39Q9UEW8 545 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 FNDC3AQ9Y2H6 1198 aaKnown RBP14.1□□□□□ -0.15
UBXN11-214ENST00000475591 PTGDR2Q9Y5Y4 395 aa14.1□□□□□ -0.15
UBXN11-214ENST00000475591 SCN5AQ14524 2016 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 H7C4K7 107 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 UBXN8O00124 270 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CCL23P55773 120 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 MRPS35P82673 323 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 UNC50Q53HI1 259 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 PIGGQ5H8A4 983 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 MDGA1Q8NFP4 955 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 GDPD5Q8WTR4 605 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 RMDN1Q96DB5 314 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CINPQ9BW66 212 aaPredicted RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 TTLL2Q9BWV7 592 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 MEAF6Q9HAF1 191 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CORO1CQ9ULV4 474 aaPredicted RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 FAM50BQ9Y247 325 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 ZNF840PA6NDX5 716 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 PQBP1O60828 265 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 NDST3O95803 873 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 IMPDH1P20839 514 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 HOXD10P28358 340 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CORO1AP31146 461 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 MRPS22P82650 360 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 LINGO4Q6UY18 593 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 ADGRG6Q86SQ4 1221 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 SDCCAG8Q86SQ7 713 aaPredicted RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 PCDH20Q8N6Y1 951 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 OR4K2Q8NGD2 314 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 OR9I1Q8NGQ6 314 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 SEPT8Q92599 483 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CCDC126Q96EE4 140 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CAPNS2Q96L46 248 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 C3orf30Q96M34 536 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 NSUN5Q96P11 429 aaKnown RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 RNF38Q9H0F5 515 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 TRPC7Q9HCX4 862 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 CCDC167Q9P0B6 97 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 UBA2Q9UBT2 640 aaPredicted RBP14.09□□□□□ -0.15
UBXN11-214ENST00000475591 GIMAP2Q9UG22 337 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 IKZF3Q9UKT9 509 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 TRAF6Q9Y4K3 522 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 PCDHGC4Q9Y5F7 938 aa14.09□□□□□ -0.15
UBXN11-214ENST00000475591 C2orf78A6NCI8 922 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 CBX4O00257 560 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 ZNF37AP17032 561 aaPredicted RBP14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PMLP29590 882 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 FMO4P31512 558 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 STC1P52823 247 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 AQP4P55087 323 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 OXCT1P55809 520 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 ART3Q13508 389 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 TRIP10Q15642 601 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 C5orf22Q49AR2 442 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 MRNIPQ6NTE8 343 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PGAM4Q8N0Y7 254 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PTGR2Q8N8N7 351 aaPredicted RBP14.08□□□□□ -0.15
UBXN11-214ENST00000475591 HHIPL1Q96JK4 782 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 MAGEH1Q9H213 219 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 EML4Q9HC35 981 aaKnown RBP14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 GALPQ9UBC7 116 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PRPF19Q9UMS4 504 aaKnown RBP14.08□□□□□ -0.15
UBXN11-214ENST00000475591 PHF24Q9UPV7 400 aa14.08□□□□□ -0.15
UBXN11-214ENST00000475591 SLC22A2O15244 555 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 STC2O76061 302 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 PRLP01236 227 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 EPOP01588 193 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 HMGA1P17096 107 aaKnown RBP14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SLC11A2P49281 568 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
UBXN11-214ENST00000475591 ZNF140P52738 457 aaPredicted RBP14.08□□□□□ -0.16
UBXN11-214ENST00000475591 CDH4P55283 916 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SH3BP2P78314 561 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 BFSP2Q13515 415 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 FLOT2Q14254 428 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 HERC3Q15034 1050 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 PFKFB4Q16877 469 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 ALG1LQ6GMV1 187 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SETD3Q86TU7 594 aaPredicted RBP14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SLC22A9Q8IVM8 553 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 PHC3Q8NDX5 983 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 PXYLP1Q8TE99 480 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 GATA6Q92908 595 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 PSKH2Q96QS6 385 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SMPD4Q9NXE4 827 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 SEPT3Q9UH03 358 aa14.08□□□□□ -0.16
UBXN11-214ENST00000475591 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms