RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TP73O15350 636 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 MMP20O60882 483 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PHF2O75151 1096 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 USP12O75317 370 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 AGTP01019 485 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 IFNB1P01574 187 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 EPOP01588 193 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 TRBC1P01850 177 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ALPIP09923 528 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PIRTP0C851 137 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CTPS1P17812 591 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ITPKAP23677 461 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ITPKBP27987 946 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 HNF1BP35680 557 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 GRIA1P42261 906 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 RPL26P61254 145 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 MRPS25P82663 173 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 RPL6Q02878 288 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CDK18Q07002 472 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 GALNT3Q14435 633 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 TRIP13Q15645 432 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PCSK7Q16549 785 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PARP6Q2NL67 630 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 P3H1Q32P28 736 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 TMEM52BQ4KMG9 183 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SIRPB2Q5JXA9 342 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 COLEC12Q5KU26 742 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SYCP2LQ5T4T6 812 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ARMC12Q5T9G4 340 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 KIAA0895LQ68EN5 471 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 FBXL19Q6PCT2 694 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CCDC137Q6PK04 289 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CRTC1Q6UUV9 634 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PCSK4Q6UW60 755 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 LIPIQ6XZB0 460 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 MICALCLQ6ZW33 695 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 DPPA4Q7L190 304 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ARMCX6Q7L4S7 300 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 TRIM69Q86WT6 500 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 HORMAD1Q86X24 394 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PELI3Q8N2H9 469 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 FAM181AQ8N9Y4 354 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SPATA4Q8NEY3 305 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CADM4Q8NFZ8 388 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 OR2T34Q8NGX1 318 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ATL2Q8NHH9 583 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PDCD6IPQ8WUM4 868 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 DNASE2BQ8WZ79 361 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 KLK6Q92876 244 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SLCO2A1Q92959 643 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 RAB7BQ96AH8 199 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SCRN2Q96FV2 425 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PPP1R16AQ96I34 528 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 FEM1CQ96JP0 617 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 HSPA12BQ96MM6 686 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 DCBLD2Q96PD2 775 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 LYSMD1Q96S90 227 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 NAP1L3Q99457 506 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 KLF6Q99612 283 aaPredicted RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 APOL2Q9BQE5 337 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 C1QTNF2Q9BXJ5 285 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CAAP1Q9H8G2 361 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PCDH9Q9HC56 1237 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 HOMER3Q9NSC5 361 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 B4GALT6Q9UBX8 382 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PCYOX1Q9UHG3 505 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 FAM153AQ9UHL3 310 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PHTF1Q9UMS5 762 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 RPL26L1Q9UNX3 145 aaKnown RBP7.01□□□□□ -1.29
LIMD1-204ENST00000474665 CA5BQ9Y2D0 317 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 SPO11Q9Y5K1 396 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 ACACAQ13085 2346 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 PLXNB3Q9ULL4 1909 aa7.01□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3DA0A087WVF3 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3IA0A087WXS9 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3EA0A087X179 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3KA0A087X1G2 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3FA6NER0 549 aaPredicted RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 LRRC72A6NJI9 287 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3LB9A6J9 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TSPAN6O43657 245 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ZNF500O60304 480 aaPredicted RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 RNGTTO60942 597 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 NEBLO76041 1014 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 HEXIM1O94992 359 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 NDST3O95803 873 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 CPP00450 1065 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 WNT1P04628 370 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 TBC1D3HP0C7X1 549 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 MAT2AP31153 395 aaKnown RBP7□□□□□ -1.29
LIMD1-204ENST00000474665 MAGEA6P43360 314 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 ABCG1P45844 678 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 FNTAP49354 379 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 LIG3P49916 1009 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 CCR5P51681 352 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 BNC1Q01954 994 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 PTSQ03393 145 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 CYP4F3Q08477 520 aa7□□□□□ -1.29
LIMD1-204ENST00000474665 MPP3Q13368 585 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms