RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 PTPN3P26045 913 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 CD40LGP29965 261 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 TGFBR1P36897 503 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 PHC1P78364 1004 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 FPGSQ05932 587 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 VARS2Q5ST30 1063 aaKnown RBP4.72□□□□□ -1.65
U2SURP-208ENST00000473835 BROXQ5VW32 411 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 OR6B2Q6IFH4 312 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 MTMR14Q8NCE2 650 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 MAGEE2Q8TD90 523 aaPredicted RBP4.72□□□□□ -1.65
U2SURP-208ENST00000473835 FAR1Q8WVX9 515 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 LRRC40Q9H9A6 602 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 C8orf4Q9NR00 106 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 IARS2Q9NSE4 1012 aaKnown RBP4.72□□□□□ -1.65
U2SURP-208ENST00000473835 GDAP2Q9NXN4 497 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 GIMAP2Q9UG22 337 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 RUVBL2Q9Y230 463 aaKnown RBP4.72□□□□□ -1.65
U2SURP-208ENST00000473835 PCDHGB1Q9Y5G3 927 aa4.72□□□□□ -1.65
U2SURP-208ENST00000473835 TIMM44O43615 452 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 CHRNB1P11230 501 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 VDRP11473 427 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 GABARAPL2P60520 117 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 TFAMQ00059 246 aaKnown RBP4.71□□□□□ -1.65
U2SURP-208ENST00000473835 SLC13A2Q13183 592 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 SLC12A1Q13621 1099 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 CAPRIN1Q14444 709 aaKnown RBP4.71□□□□□ -1.65
U2SURP-208ENST00000473835 CRTC3Q6UUV7 619 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 LACC1Q8IV20 430 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 SLC41A1Q8IVJ1 513 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 PJA1Q8NG27 643 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 HCAR2Q8TDS4 363 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 SH3RF2Q8TEC5 729 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 PHF10Q8WUB8 498 aaKnown RBP4.71□□□□□ -1.65
U2SURP-208ENST00000473835 POMKQ9H5K3 350 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 NGRNQ9NPE2 291 aaKnown RBP4.71□□□□□ -1.65
U2SURP-208ENST00000473835 FZD10Q9ULW2 581 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 PTGDR2Q9Y5Y4 395 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 LTBP3Q9NS15 1303 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 COL4A5P29400 1685 aa4.71□□□□□ -1.65
U2SURP-208ENST00000473835 A8MT66 165 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KPNA6O60684 536 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KCNC1P48547 511 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 RGS7P49802 495 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TMEM236Q5W0B7 351 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TXNDC11Q6PKC3 985 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 STRADAQ7RTN6 431 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CUZD1Q86UP6 607 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 ERO1BQ86YB8 467 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KIAA2013Q8IYS2 634 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CHPFQ8IZ52 775 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 SFRP1Q8N474 314 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 BEND7Q8N7W2 519 aaPredicted RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 AFG1LQ8WV93 481 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 HEXDCQ8WVB3 486 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 MAGED4Q96JG8 741 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 LPIN3Q9BQK8 851 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CEP44Q9C0F1 390 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KLHL25Q9H0H3 589 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CXCL16Q9H2A7 254 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CPNE5Q9HCH3 593 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 VANGL2Q9ULK5 521 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TNS1Q9HBL0 1735 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 ZNF638Q14966 1978 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 NCK1P16333 377 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CHRNEQ04844 493 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 GALNT1Q10472 559 aaPredicted RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 VPS26BQ4G0F5 336 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TECRLQ5HYJ1 363 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 PPP1R26Q5T8A7 1209 aaPredicted RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 BSPRYQ5W0U4 402 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 EEF1DP3Q658K8 133 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KIAA1958Q8N8K9 716 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 OR7G1Q8NGA0 311 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 HDAC2Q92769 488 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 EFHD1Q9BUP0 239 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 NDEL1Q9GZM8 345 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TUBB1Q9H4B7 451 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 RHOJQ9H4E5 214 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 SP140LQ9H930 580 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 OSGIN1Q9UJX0 560 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 BRCA1P38398 1863 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 A0A1B0GTL3 188 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 DCLK1O15075 740 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 MT-ND1P03886 318 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CXCL8P10145 99 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CASP3P42574 277 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 ISL1P61371 349 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 PITX1P78337 314 aaPredicted RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 BNIP2Q12982 314 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 SKIV2LQ15477 1246 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 RABL3Q5HYI8 236 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 CATSPER4Q7RTX7 472 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 KIFC1Q9BW19 673 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TESMINQ9Y4I5 508 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 C9JVG2 144 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 GPIP06744 558 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 PRKCAP17252 672 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 PSMA4P25789 261 aaKnown RBP4.71□□□□□ -1.66
U2SURP-208ENST00000473835 SDC4P31431 198 aa4.71□□□□□ -1.66
U2SURP-208ENST00000473835 TGFBR2P37173 567 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms