RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 MFSD1Q9H3U5 465 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.42■□□□□ 0.38
RRP1-202ENST00000471909 ARHGAP26Q9UNA1 814 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 YIPF1Q9Y548 306 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 MIA3Q5JRA6 1907 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 MICAL3Q7RTP6 2002 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 A0A087X1B8 175 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 C2orf78A6NCI8 922 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 CAPN8A6NHC0 703 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 SMIM18P0DKX4 95 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 ALDH1A3P47895 512 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 SLC12A2P55011 1212 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 PEX6Q13608 980 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 SPOUT1Q5T280 376 aaKnown RBP17.42■□□□□ 0.38
RRP1-202ENST00000471909 OGFRL1Q5TC84 451 aaPredicted RBP17.42■□□□□ 0.38
RRP1-202ENST00000471909 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 EPGNQ6UW88 154 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 TMC7Q7Z402 723 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 MAPK15Q8TD08 544 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 BLOC1S5Q8TDH9 187 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 HEXDCQ8WVB3 486 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 MGME1Q9BQP7 344 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 RETREG1Q9H6L5 497 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 PTTG2Q9NZH5 202 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 MARCH4Q9P2E8 410 aaPredicted RBP17.42■□□□□ 0.38
RRP1-202ENST00000471909 ARL5AQ9Y689 179 aa17.42■□□□□ 0.38
RRP1-202ENST00000471909 EPOP01588 193 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 ASLP04424 464 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 HLA-DPA1P20036 260 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 MPSTP25325 297 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 CLCN5P51795 746 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 PRAMEP78395 509 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 PLD1Q13393 1074 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 BTG3Q14201 252 aaPredicted RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 PTPRCAPQ14761 206 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 ILKAPQ9H0C8 392 aaPredicted RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 Q9H521 79 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 SUDS3Q9H7L9 328 aaPredicted RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 IGSF5Q9NSI5 407 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 HSFX1Q9UBD0 423 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 DCXO43602 365 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 CLDN11O75508 207 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 ZMPSTE24O75844 475 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 FGF1P05230 155 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 SERPINF2P08697 491 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 PIRTP0C851 137 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 IRF1P10914 325 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 RPL5P46777 297 aaKnown RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 RGRP47804 291 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 MTTPP55157 894 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 SLC9B1Q4ZJI4 515 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 ARL13AQ5H913 290 aaPredicted RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 FSCBQ5H9T9 825 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 TPGS2Q68CL5 300 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 FAM117BQ6P1L5 589 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 PHTF2Q8N3S3 785 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 MARVELD2Q8N4S9 558 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 GABPB2Q8TAK5 448 aaPredicted RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 TBATAQ96M53 351 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 PSKH2Q96QS6 385 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 MRPL46Q9H2W6 279 aaKnown RBP17.41■□□□□ 0.38
RRP1-202ENST00000471909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
RRP1-202ENST00000471909 TBX21Q9UL17 535 aa17.41■□□□□ 0.38
RRP1-202ENST00000471909 KDELR3O43731 214 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 S1PR4O95977 384 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 COX4I1P13073 169 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 PRKAA2P54646 552 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 OXCT1P55809 520 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 ACVR1Q04771 509 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TLR1Q15399 786 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 SLC39A11Q8N1S5 342 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 PQLC1Q8N2U9 271 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TOP1MTQ969P6 601 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 DCUN1D1Q96GG9 259 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TRIB3Q96RU7 358 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 MRPL57Q9BQC6 102 aaKnown RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 KLF16Q9BXK1 252 aaPredicted RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 C6orf203Q9P0P8 240 aaPredicted RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 UBA2Q9UBT2 640 aaPredicted RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 SEPT3Q9UH03 358 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 RAP2CQ9Y3L5 183 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TSPAN3O60637 253 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 CLPTM1O96005 669 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 PMLP29590 882 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 PRDX6P30041 224 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 CSHL1Q14406 222 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TAF12Q16514 161 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 HECTD2Q5U5R9 776 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 TRMT2BQ96GJ1 504 aaKnown RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
RRP1-202ENST00000471909 PSMD13Q9UNM6 376 aa17.4■□□□□ 0.38
RRP1-202ENST00000471909 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.39■□□□□ 0.37
RRP1-202ENST00000471909 ILVBLA1L0T0 632 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms