RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 TRIM7Q9C029 511 aa12.34□□□□□ -0.43
RPA3-206ENST00000463632 NAT10Q9H0A0 1025 aaKnown RBP12.34□□□□□ -0.43
RPA3-206ENST00000463632 CWC15Q9P013 229 aaKnown RBP12.34□□□□□ -0.43
RPA3-206ENST00000463632 APPL1Q9UKG1 709 aa12.34□□□□□ -0.43
RPA3-206ENST00000463632 TMEM191CA6NGB0 347 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 LRRC53A6NM62 1247 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
RPA3-206ENST00000463632 EFSO43281 561 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 NUDT21O43809 227 aaKnown RBP12.33□□□□□ -0.44
RPA3-206ENST00000463632 NOBOXO60393 691 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 LIPCP11150 499 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 MYCLP1P12525 358 aaPredicted RBP12.33□□□□□ -0.44
RPA3-206ENST00000463632 ATP1A3P13637 1013 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 AMPD1P23109 780 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 ETV5P41161 510 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 MAXP61244 160 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 HLTFQ14527 1009 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPA3-206ENST00000463632 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 TP53INP2Q8IXH6 220 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 ATPAF2Q8N5M1 289 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 LZTR1Q8N653 840 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 ARFGAP1Q8N6T3 406 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 SNRNP27Q8WVK2 155 aaKnown RBP12.33□□□□□ -0.44
RPA3-206ENST00000463632 EXTL1Q92935 676 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 TMEM159Q96B96 161 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 ECHDC3Q96DC8 303 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 PSKH2Q96QS6 385 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 HAUS4Q9H6D7 363 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.44
RPA3-206ENST00000463632 TAAR2Q9P1P5 351 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 TTLL3Q9Y4R7 772 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
RPA3-206ENST00000463632 TRBV23OR9-2A0A075B6M9 112 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 A0A1W2PQ67 120 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 ECEL1O95672 775 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 HOXC4P09017 264 aaPredicted RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 CCNB1P14635 433 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 PNLIPP16233 465 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 CTPS1P17812 591 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 AK4P27144 223 aaPredicted RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 TRIM23P36406 574 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 HSPA9P38646 679 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 ETV3P41162 512 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 GPR1P46091 355 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 ZNF135P52742 658 aaPredicted RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 EPHB1P54762 984 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 KCNC4Q03721 635 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 ZFP36L1Q07352 338 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 KRT81Q14533 505 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 CNGA3Q16281 694 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 TDRD12Q587J7 1177 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 ARMC12Q5T9G4 340 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 USP45Q70EL2 814 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 PELI3Q8N2H9 469 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 RCBTB1Q8NDN9 531 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 COQ10AQ96MF6 247 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 ZNF599Q96NL3 588 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 NUDT22Q9BRQ3 303 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 CLMPQ9H6B4 373 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 NOD2Q9HC29 1040 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
RPA3-206ENST00000463632 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPA3-206ENST00000463632 KCTD5Q9NXV2 234 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 CD84Q9UIB8 345 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 SUFUQ9UMX1 484 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 SHROOM3Q8TF72 1996 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 BPTFQ12830 3046 aa12.32□□□□□ -0.44
RPA3-206ENST00000463632 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 SOCS5O75159 536 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 LRCH4O75427 683 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 ASMTLO95671 621 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 CPNE6O95741 557 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 FGF1P05230 155 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 SKILP12757 684 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 CCL4P13236 92 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 MPSTP25325 297 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 GJC1P36383 396 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 ACTR1BP42025 376 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 MMP13P45452 471 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 POLD2P49005 469 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 HCAR3P49019 387 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 ACTR1AP61163 376 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 CDK3Q00526 305 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 TYRO3Q06418 890 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 PEX6Q13608 980 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 DPYSQ14117 519 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 C16orf72Q14CZ0 275 aa12.31□□□□□ -0.44
RPA3-206ENST00000463632 PTPRRQ15256 657 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms