RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-215	ENST00000461974	OAZ2	O95190	189 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CYP1A2	P05177	515 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	ACTN1	P12814	892 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	KRT10	P13645	584 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	NAGA	P17050	411 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	HOXD3	P31249	432 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	HADHA	P40939	763 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	GARS	P41250	739 aa	Known RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	FASLG	P48023	281 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	KCNJ4	P48050	445 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	METAP2	P50579	478 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CDH8	P55286	799 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	MRPS34	P82930	218 aa	Known RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	NEDD9	Q14511	834 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	WTAP	Q15007	396 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	COL28A1	Q2UY09	1125 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	PMS2CL	Q68D20	193 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CACNA2D4	Q7Z3S7	1137 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	SZRD1	Q7Z422	152 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	PPP1R13B	Q96KQ4	1090 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	APOLD1	Q96LR9	279 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	HARBI1	Q96MB7	349 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	ZNF778	Q96MU6	729 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CMTM3	Q96MX0	182 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	WDFY2	Q96P53	400 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	NCAPG	Q9BPX3	1015 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	C1QTNF1	Q9BXJ1	281 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	RBM38	Q9H0Z9	239 aa	Known RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	MAGIX	Q9H6Y5	334 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	RRP7BP	Q9NSQ0	103 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	OR6C3	Q9NZP0	311 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CWC15	Q9P013	229 aa	Known RBP	4.06	□□□□□ -1.76
FN1-215	ENST00000461974	CEPT1	Q9Y6K0	416 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	MAU2	Q9Y6X3	613 aa		4.06	□□□□□ -1.76
FN1-215	ENST00000461974	ARHGEF11	O15085	1522 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	WDR62	O43379	1518 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FAM90A10P	A6NDY2	464 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	BECN2	A8MW95	431 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974		B4DGG1	531 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE7	O76087	117 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FTCD	O95954	541 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE12F	P0CL80	117 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE12G	P0CL81	117 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE12I	P0CL82	117 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	RARG	P13631	454 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	POR	P16435	677 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	TMEM11	P17152	192 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	AMT	P48728	403 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ZNF81	P51508	661 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	NUDT6	P53370	316 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	DSC1	Q08554	894 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974		Q0VFX4	171 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE1	Q13065	139 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GAGE4	Q13068	117 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	TRAF1	Q13077	416 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	CHAF1B	Q13112	559 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GPS2	Q13227	327 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	NAE1	Q13564	534 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	CTTN	Q14247	550 aa	Known RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	MYBPC2	Q14324	1141 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	HNF4G	Q14541	408 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ASTE1	Q2TB18	679 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FSCB	Q5H9T9	825 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	RAB41	Q5JT25	222 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ANKRD54	Q6NXT1	300 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	PQLC2	Q6ZP29	291 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	DPPA4	Q7L190	304 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	CHST9	Q7L1S5	443 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	SHF	Q7M4L6	423 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	IRF2BP2	Q7Z5L9	587 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	CTU1	Q7Z7A3	348 aa	Known RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	EPHX4	Q8IUS5	362 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	NME8	Q8N427	588 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ARRDC2	Q8TBH0	407 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	TRPC4AP	Q8TEL6	797 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FEM1C	Q96JP0	617 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ZNF48	Q96MX3	618 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ZNF570	Q96NI8	536 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	FAM234A	Q9H0X4	552 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	RANGRF	Q9HD47	186 aa	Predicted RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	AGO1	Q9UL18	857 aa	Known RBP	4.05	□□□□□ -1.76
FN1-215	ENST00000461974	PAM16	Q9Y3D7	125 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	RABGAP1	Q9Y3P9	1069 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974	ATAD2B	Q9ULI0	1458 aa		4.05	□□□□□ -1.76
FN1-215	ENST00000461974		A0A1B0GVM2	712 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	CPED1	A4D0V7	1026 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	CLEC18A	A5D8T8	446 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	OR6C75	A6NL08	312 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	KDM4E	B2RXH2	506 aa	Predicted RBP	4.04	□□□□□ -1.76
FN1-215	ENST00000461974	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.04	□□□□□ -1.76
FN1-215	ENST00000461974	TNFRSF13B	O14836	293 aa	Predicted RBP	4.04	□□□□□ -1.76
FN1-215	ENST00000461974	ITM2A	O43736	263 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	HNRNPCL1	O60812	293 aa	Known RBP	4.04	□□□□□ -1.76
FN1-215	ENST00000461974	JRK	O75564	520 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	NKX2-2	O95096	273 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	VNN2	O95498	520 aa		4.04	□□□□□ -1.76
FN1-215	ENST00000461974	GABRB1	P18505	474 aa		4.04	□□□□□ -1.76

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