RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 PAF1Q8N7H5 531 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 SCRN2Q96FV2 425 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 NAF1Q96HR8 494 aaKnown RBP18.45■□□□□ 0.54
COL9A2-205ENST00000461118 ZNF578Q96N58 590 aaPredicted RBP18.45■□□□□ 0.54
COL9A2-205ENST00000461118 OLFM3Q96PB7 478 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 LGMNQ99538 433 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 IL12RB2Q99665 862 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 SEMA4CQ9C0C4 833 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 BRD8Q9H0E9 1235 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 GOLPH3Q9H4A6 298 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 CPNE5Q9HCH3 593 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 ASCL3Q9NQ33 180 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 COQ6Q9Y2Z9 468 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 HEY1Q9Y5J3 304 aa18.45■□□□□ 0.54
COL9A2-205ENST00000461118 MAST4O15021 2626 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 A0A1W2PNU3 283 aaPredicted RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 LZTS3O60299 673 aaPredicted RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 PGLSO95336 258 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 CPP00450 1065 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 NME1P15531 152 aaKnown RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 NR2C2P49116 596 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 PCBP4P57723 403 aaKnown RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 HNRNPKP61978 463 aaKnown RBP eCLIP18.44■□□□□ 0.544e-6■■■■□ 20.5
COL9A2-205ENST00000461118 IFI35P80217 286 aaPredicted RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 ITKQ08881 620 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 IRF4Q15306 451 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 TPRG1LQ5T0D9 272 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 DAAM2Q86T65 1068 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 RFX6Q8HWS3 928 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 ARRDC2Q8TBH0 407 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 PDCD6IPQ8WUM4 868 aaKnown RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 APOLD1Q96LR9 279 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 MCCC1Q96RQ3 725 aaPredicted RBP18.44■□□□□ 0.54
COL9A2-205ENST00000461118 LACRTQ9GZZ8 138 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 B4GALT6Q9UBX8 382 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 DUSP10Q9Y6W6 482 aa18.44■□□□□ 0.54
COL9A2-205ENST00000461118 RECQL5O94762 991 aaPredicted RBP18.43■□□□□ 0.54
COL9A2-205ENST00000461118 ZRANB2O95218 330 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL9A2-205ENST00000461118 HLA-DQB2P05538 268 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 GP1BAP07359 652 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 ELFN1P0C7U0 828 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 LSSP48449 732 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 VAV2P52735 878 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 THOP1P52888 689 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 GABREP78334 506 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 TFDP2Q14188 446 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 IHHQ14623 411 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 TFDP3Q5H9I0 405 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 SPOCD1Q6ZMY3 1216 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 BZW1Q7L1Q6 419 aaKnown RBP18.43■□□□□ 0.54
COL9A2-205ENST00000461118 EXD1Q8NHP7 514 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 LRRN4Q8WUT4 740 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 SNRNP27Q8WVK2 155 aaKnown RBP18.43■□□□□ 0.54
COL9A2-205ENST00000461118 PIH1D2Q8WWB5 315 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 TTC9Q92623 222 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 WBP1Q96G27 269 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 DNAJC28Q9NX36 388 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 NLGN3Q9NZ94 848 aa18.43■□□□□ 0.54
COL9A2-205ENST00000461118 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL9A2-205ENST00000461118 NEMP2A6NFY4 417 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 KCNK1O00180 336 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 PPP1R12AO14974 1030 aaPredicted RBP18.42■□□□□ 0.54
COL9A2-205ENST00000461118 USP12O75317 370 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 CSO75390 466 aaKnown RBP18.42■□□□□ 0.54
COL9A2-205ENST00000461118 NEBLO76041 1014 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 JCHAINP01591 159 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 PDHA1P08559 390 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 GM2AP17900 193 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 VIPR1P32241 457 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 TMPRSS3P57727 454 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 ERVPABLB-1P60509 514 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 DSC2Q02487 901 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 EIF2B5Q13144 721 aaKnown RBP18.42■□□□□ 0.54
COL9A2-205ENST00000461118 MTM1Q13496 603 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 ZNF542PQ5EBM4 170 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 NPNTQ6UXI9 565 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 MACC1Q6ZN28 852 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 NDUFAF2Q8N183 169 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 CNTD1Q8N815 330 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 FAM181AQ8N9Y4 354 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 SPC24Q8NBT2 197 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 ACRBPQ8NEB7 543 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 COQ10AQ96MF6 247 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 POLR1BQ9H9Y6 1135 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 KCTD5Q9NXV2 234 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 KLF15Q9UIH9 416 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 CSNK1G3Q9Y6M4 447 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 PIEZO2Q9H5I5 2752 aa18.42■□□□□ 0.54
COL9A2-205ENST00000461118 H3BM21 787 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 J3QKU1 62 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 K7ESM1 405 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 PSMD11O00231 422 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 SCAMP1O15126 338 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 CST8O60676 142 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 HEXIM1O94992 359 aaKnown RBP18.41■□□□□ 0.54
COL9A2-205ENST00000461118 CYP2A6P11509 494 aaPredicted RBP18.41■□□□□ 0.54
COL9A2-205ENST00000461118 KRT10P13645 584 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 TGM2P21980 687 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms