RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 EXD3Q8N9H8 876 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 OR56A4Q8NGH8 313 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 TEKT4Q8WW24 435 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 SYN2Q92777 582 aaPredicted RBP15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 FUBP1Q96AE4 644 aaKnown RBP15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 CCDC74AQ96AQ1 378 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 IQCDQ96DY2 449 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 NUS1Q96E22 293 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 NUDCD1Q96RS6 583 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 PCDH18Q9HCL0 1135 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 LUC7L2Q9Y383 392 aaKnown RBP15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 PCDHGC4Q9Y5F7 938 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 ENTPD2Q9Y5L3 495 aa15.79■□□□□ 0.12
CHCHD3-204ENST00000457942 A0A1W2PQ67 120 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 MYO1FO00160 1098 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 AGRPO00253 132 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 TRAFD1O14545 582 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 CYP2A6P11509 494 aaPredicted RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 PTMSP20962 102 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 MAXP61244 160 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 ITKQ08881 620 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 SRSF6Q13247 344 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 HADHQ16836 314 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 KIF26BQ2KJY2 2108 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 MARC1Q5VT66 337 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 TXNRD3NBQ6F5E7 133 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 LVRNQ6Q4G3 990 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 SDR16C5Q8N3Y7 309 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 NIPA2Q8N8Q9 360 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 SNRNP27Q8WVK2 155 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 OR1E3Q8WZA6 343 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 GRAMD1AQ96CP6 724 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 CYP4F12Q9HCS2 524 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 FGF22Q9HCT0 170 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 MRPL40Q9NQ50 206 aaKnown RBP15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 IFNKQ9P0W0 207 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 IL17BQ9UHF5 180 aa15.78■□□□□ 0.12
CHCHD3-204ENST00000457942 A0A087X0T9 212 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 TMEM202A6NGA9 273 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 PDE2AO00408 941 aaPredicted RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 TNFSF15O95150 251 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 TPM3P06753 285 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 FAM228BP0C875 321 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 VIPR1P32241 457 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 SLC25A11Q02978 314 aaKnown RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 SRSF1Q07955 248 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 ARHGEF7Q14155 803 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 CNGA3Q16281 694 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 ZFYVE27Q5T4F4 411 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 ALKBH5Q6P6C2 394 aaKnown RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 PGBD5Q8N414 524 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 FAM46DQ8NEK8 389 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 ZNF564Q8TBZ8 553 aaPredicted RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 PRR11Q96HE9 360 aaPredicted RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 SLC46A1Q96NT5 459 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 GFM1Q96RP9 751 aaKnown RBP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 RBM15Q96T37 977 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 MGME1Q9BQP7 344 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 NOD2Q9HC29 1040 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 EPB41L5Q9HCM4 733 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 NT5MQ9NPB1 228 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 CTTNBP2NLQ9P2B4 639 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 CAPN11Q9UMQ6 739 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 TTLL3Q9Y4R7 772 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 DGKBQ9Y6T7 804 aa15.77■□□□□ 0.12
CHCHD3-204ENST00000457942 B4DGG1 531 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 MAFKO60675 156 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 CYP1A2P05177 515 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 RPLP0P05388 317 aaKnown RBP15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 PBX1P40424 430 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 TRAF2Q12933 501 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 MMRN1Q13201 1228 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 ARMC12Q5T9G4 340 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 KCTD16Q68DU8 428 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 PNCKQ6P2M8 343 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 USP45Q70EL2 814 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 ARL14Q8N4G2 192 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 OR6C4Q8NGE1 309 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 WDR36Q8NI36 951 aaKnown RBP15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 EXTL1Q92935 676 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 NSMCE3Q96MG7 304 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 ARHGAP9Q9BRR9 750 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 PHPT1Q9NRX4 125 aaPredicted RBP15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 PHTF1Q9UMS5 762 aa15.76■□□□□ 0.11
CHCHD3-204ENST00000457942 CCDC187A0A096LP49 1063 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 HTRA2O43464 458 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 MFSD11O43934 449 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 HEXIM1O94992 359 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 PEX11BO96011 259 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 GYPCP04921 128 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 FAM87AP0C7U9 286 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 MYCLP1P12525 358 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CTPS1P17812 591 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CR2P20023 1033 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CASP14P31944 242 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 ETV3P41162 512 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 SKOR1P84550 965 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms