RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 HSD11B1LQ7Z5J1 315 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLFN11Q7Z7L1 901 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZSCAN30Q86W11 494 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ARHGAP12Q8IWW6 846 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PLPP6Q8IY26 295 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ELOA2Q8IYF1 753 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 IL22RA1Q8N6P7 574 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 C3orf20Q8ND61 904 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZDHHC1Q8WTX9 485 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CENPIQ92674 756 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NTAN1Q96AB6 310 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GRAMD1AQ96CP6 724 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KCTD15Q96SI1 283 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SNRNP25Q9BV90 132 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SELENOOQ9BVL4 669 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CINPQ9BW66 212 aaPredicted RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC12A9Q9BXP2 914 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC39A8Q9C0K1 460 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC25A18Q9H1K4 315 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 VPS16Q9H269 839 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SUV39H2Q9H5I1 410 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DHX35Q9H5Z1 703 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LRRC19Q9H756 370 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SP110Q9HB58 689 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 APMAPQ9HDC9 416 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 OCIAD1Q9NX40 245 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ADAM22Q9P0K1 906 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SEPT10Q9P0V9 454 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ANKMY1Q9P2S6 941 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KLHL3Q9UH77 587 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PCSK1NQ9UHG2 260 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 APPL1Q9UKG1 709 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FZD10Q9ULW2 581 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SUFUQ9UMX1 484 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PCDHB11Q9Y5F2 797 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MRPS18BQ9Y676 258 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DGKBQ9Y6T7 804 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 HIVEP3Q5T1R4 2406 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TNRC6AQ8NDV7 1962 aaKnown RBP6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CSMD1Q96PZ7 3565 aa6□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CREBBPQ92793 2442 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ITPR2Q14571 2701 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TCRBV5S1A1TA0A578 114 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 K7EM74 188 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 EEF2KO00418 725 aaKnown RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PPM1DO15297 605 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NKX2-8O15522 239 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NUDT21O43809 227 aaKnown RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RAD1O60671 282 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PALMO75781 387 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MAP3K6O95382 1288 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CPNE6O95741 557 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CPP00450 1065 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FGF1P05230 155 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RNF224P0DH78 156 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 THRAP10827 490 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UNGP13051 313 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CCNB1P14635 433 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACTR1BP42025 376 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UQCRFS1P47985 274 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PEX5P50542 639 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SCNN1BP51168 640 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ACTR1AP61163 376 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CDK3Q00526 305 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ILF3Q12906 894 aaKnown RBP eCLIP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TRAF2Q12933 501 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NFATC2Q13469 925 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 KRT31Q15323 416 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SYCP1Q15431 976 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SMTNL2Q2TAL5 461 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TCP11X2Q5H9J9 407 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PPP6R3Q5H9R7 873 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RAET1GQ6H3X3 334 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 BORAQ6PGQ7 559 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LVRNQ6Q4G3 990 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 RFX8Q6ZV50 586 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CYP4V2Q6ZWL3 525 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 DPPA4Q7L190 304 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SRLQ86TD4 932 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMEM135Q86UB9 458 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FAM114A1Q8IWE2 563 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NRSN1Q8IZ57 195 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CACNA2D3Q8IZS8 1091 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NAGSQ8N159 534 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 UMODL1-AS1Q8N2C9 162 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZSCAN1Q8NBB4 408 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ZNF564Q8TBZ8 553 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 SLC37A2Q8TED4 501 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 LRRN4Q8WUT4 740 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 NKD1Q969G9 470 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 STK33Q9BYT3 514 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 FRMD8Q9BZ67 464 aaPredicted RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 CLSTN2Q9H4D0 955 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ATP13A3Q9H7F0 1226 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 ETNK2Q9NVF9 386 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 GEMIN8Q9NWZ8 242 aaKnown RBP5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 TMEM98Q9Y2Y6 226 aa5.99□□□□□ -1.45
HLA-DPA3-207ENST00000454398 PCDHGC4Q9Y5F7 938 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms