RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KCTD4Q8WVF5 259 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 CCDC106Q9BWC9 280 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 CADM1Q9BY67 442 aaKnown RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 ACE2Q9BYF1 805 aaPredicted RBP10.76□□□□□ -0.69
PKP4-206ENST00000452162 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 OXSMQ9NWU1 459 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 DNAJC28Q9NX36 388 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 FBXO5Q9UKT4 447 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 DUSP12Q9UNI6 340 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 BPTFQ12830 3046 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 ZDBF2Q9HCK1 2354 aa10.76□□□□□ -0.69
PKP4-206ENST00000452162 TARM1B6A8C7 271 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 MUSKO15146 869 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 TRIM13O60858 407 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 H2AFYO75367 372 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 MBL2P11226 248 aaPredicted RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 ESRRAP11474 423 aaPredicted RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 SAT1P21673 171 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 HOXD9P28356 352 aaPredicted RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 ETFBP38117 255 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 RAB10P61026 200 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 SLC7A9P82251 487 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ICE2Q659A1 982 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 RFWD3Q6PCD5 774 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 KLHDC10Q6PID8 442 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 CFAP52Q8N1V2 620 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 CELF5Q8N6W0 485 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 OR13J1Q8NGT2 312 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 STYXQ8WUJ0 223 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ZFYVE19Q96K21 471 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ZNF599Q96NL3 588 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 GPR78Q96P69 363 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 RETREG1Q9H6L5 497 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 ARHGAP26Q9UNA1 814 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 RPL26L1Q9UNX3 145 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 CPQQ9Y646 472 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 TK2O00142 265 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 GJB3O75712 270 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 STMN1P16949 149 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 PFKLP17858 780 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 CRABP2P29373 138 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 GDI1P31150 447 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 IDH3AP50213 366 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ALDH18A1P54886 795 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 TBCCQ15814 346 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 IER5LQ5T953 404 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ALG1LQ6GMV1 187 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 LRRC8EQ6NSJ5 796 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 BPIFB1Q8TDL5 484 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 SH3RF2Q8TEC5 729 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 FEM1CQ96JP0 617 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 ZFRQ96KR1 1074 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 RILPQ96NA2 401 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 SEMA3CQ99985 751 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 TRMT61BQ9BVS5 477 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 GATA5Q9BWX5 397 aaPredicted RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 POLR1EQ9GZS1 481 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 GKN1Q9NS71 199 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 OBP2AQ9NY56 170 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
PKP4-206ENST00000452162 ACOT9Q9Y305 439 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 COL4A3Q01955 1670 aa10.75□□□□□ -0.69
PKP4-206ENST00000452162 LEFTY2O00292 366 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 SCAMP3O14828 347 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 AURKAO14965 403 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 GSC2O15499 205 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 SRFP11831 508 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 CCND1P24385 295 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 PRKAA2P54646 552 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 TAS2R39P59534 338 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 FCHO2Q0JRZ9 810 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 DLG1Q12959 904 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ZNF460Q14592 562 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ZNF77Q15935 545 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 SWT1Q5T5J6 900 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 GALNT7Q86SF2 657 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 OR52K2Q8NGK3 314 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 CALML6Q8TD86 181 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 SREK1Q8WXA9 508 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 EDAQ92838 391 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 WBP2Q969T9 261 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 PLD4Q96BZ4 506 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ASIC4Q96FT7 647 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 ELMO2Q96JJ3 720 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 PRICKLE1Q96MT3 831 aaPredicted RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 TSNARE1Q96NA8 513 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 NACA2Q9H009 215 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 MAGEH1Q9H213 219 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 TAS2R1Q9NYW7 299 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 RUVBL2Q9Y230 463 aaKnown RBP10.74□□□□□ -0.69
PKP4-206ENST00000452162 COL4A2P08572 1712 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 A0A087X1B8 175 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 A0A0D9SEW6 157 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 GYG2O15488 501 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 SLC7A4O43246 635 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 LDB2O43679 373 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 KLHL2O95198 593 aa10.74□□□□□ -0.69
PKP4-206ENST00000452162 HSPA4LO95757 839 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms