RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 ELMO2Q96JJ3 720 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 OMDQ99983 421 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 PITPNM3Q9BZ71 974 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 GPR63Q9BZJ6 419 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 CIPCQ9C0C6 399 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 SLC8A2Q9UPR5 921 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 PKP3Q9Y446 797 aa14.27□□□□□ -0.13
USP39-207ENST00000450066 A0A1W2PQ67 120 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 CAPN8A6NHC0 703 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 KLF11O14901 512 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 BNIP3LO60238 219 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SLC4A1P02730 911 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SLC35E2BP0CK96 405 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 COL6A2P12110 1019 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SAT1P21673 171 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 RECQLP46063 649 aaPredicted RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 STC1P52823 247 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 DBN1Q16643 649 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 LYSMD3Q7Z3D4 306 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 LDB1Q86U70 411 aaPredicted RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 ZSWIM9Q86XI8 627 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 MYLIPQ8WY64 445 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 GRAMD1AQ96CP6 724 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SEC16BQ96JE7 1060 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 LYSMD1Q96S90 227 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 TCF12Q99081 682 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 ZDHHC6Q9H6R6 413 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 HPS4Q9NQG7 708 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 INTS10Q9NVR2 710 aaKnown RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 SIRPGQ9P1W8 387 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 DEC1Q9P2X7 70 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 CORO1CQ9ULV4 474 aaPredicted RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 PHTF1Q9UMS5 762 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 ACOT9Q9Y305 439 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 PPIL1Q9Y3C6 166 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 PROCP04070 461 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 BPGMP07738 259 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 HNF1BP35680 557 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SLC12A2P55011 1212 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 TAS2R39P59534 338 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 SEMA3AQ14563 771 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 CDKN3Q16667 212 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 PTPRNQ16849 979 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 C16orf46Q6P387 395 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 CEP97Q8IW35 865 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 PLD6Q8N2A8 252 aaKnown RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 RAB3IL1Q8TBN0 382 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 EID2BQ96D98 161 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 MYADMQ96S97 322 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 ELAC2Q9BQ52 826 aaKnown RBP14.26□□□□□ -0.13
USP39-207ENST00000450066 ZFYVE1Q9HBF4 777 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 TMEM216Q9P0N5 145 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 FKBPLQ9UIM3 349 aa14.26□□□□□ -0.13
USP39-207ENST00000450066 TTC34A8MYJ7 566 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 EBAG9O00559 213 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 PHGDHO43175 533 aaKnown RBP14.25□□□□□ -0.13
USP39-207ENST00000450066 EDF1O60869 148 aaKnown RBP14.25□□□□□ -0.13
USP39-207ENST00000450066 NEFHP12036 1026 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 PMLP29590 882 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 IRF9Q00978 393 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 CTC1Q2NKJ3 1217 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 RBM20Q5T481 1227 aaKnown RBP14.25□□□□□ -0.13
USP39-207ENST00000450066 GRAMD4Q6IC98 578 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 FAM47EQ6ZV65 393 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 NUDCD3Q8IVD9 361 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 CACNA2D3Q8IZS8 1091 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 CPA6Q8N4T0 437 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 PNPLA1Q8N8W4 532 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 CCDC63Q8NA47 563 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 CHST14Q8NCH0 376 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 ST13P5Q8NFI4 369 aaPredicted RBP14.25□□□□□ -0.13
USP39-207ENST00000450066 SCRN2Q96FV2 425 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 TSPAN17Q96FV3 270 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 RIPOR3Q96MK2 946 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 C1QTNF1Q9BXJ1 281 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 BPIFA1Q9NP55 256 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 SLCO1B3Q9NPD5 702 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 VWA7Q9Y334 891 aa14.25□□□□□ -0.13
USP39-207ENST00000450066 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
USP39-207ENST00000450066 A0A087X1B8 175 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 C1orf232A0A0U1RR37 186 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 SNX3O60493 162 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 TBX10O75333 385 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 UGT2B4P06133 528 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 LAMP2P13473 410 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 BMP1P13497 986 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 BGNP21810 368 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 MC4RP32245 332 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 GMPRP36959 345 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 SLC6A11P48066 632 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 DLX2Q07687 328 aaPredicted RBP14.24□□□□□ -0.13
USP39-207ENST00000450066 PEX6Q13608 980 aa14.24□□□□□ -0.13
USP39-207ENST00000450066 HECTD2Q5U5R9 776 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms