RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DOK2O60496 412 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 CCNDBP1O95273 360 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FTCDO95954 541 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 SCGB1D1O95968 90 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM90A13PP0C7W8 464 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM90A24PP0C7X0 464 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 IL7RP16871 459 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 GPTP24298 496 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 NFKBIAP25963 317 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 ITGB8P26012 769 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 HNRNPH1P31943 449 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 RPL3P39023 403 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 MLH1P40692 756 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 SORDQ00796 357 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 CRYZQ08257 329 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 CSTF3Q12996 717 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 NAE1Q13564 534 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 NEDD9Q14511 834 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 USP41Q3LFD5 358 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FAM69BQ5VUD6 431 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 LRCH2Q5VUJ6 765 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 NCEH1Q6PIU2 408 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 B3GNT6Q6ZMB0 384 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 C4orf50Q6ZRC1 276 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 CLIP4Q8N3C7 705 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FRMD1Q8N878 549 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 ARHGEF2Q92974 986 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 LRFN5Q96NI6 719 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 PLEKHA5Q9HAU0 1116 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 DLGAP2Q9P1A6 1054 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 CORO1CQ9ULV4 474 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 FHOD3Q2V2M9 1422 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 SAMD9Q5K651 1589 aa4.6□□□□□ -1.67
HMGB3P6-201ENST00000444896 ZIC3O60481 467 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 GLUD1P00367 558 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 CENPBP07199 599 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 ACADMP11310 421 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 RARGP13631 454 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 TM4SF1P30408 202 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 EIF2S3P41091 472 aaKnown RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 GLUD2P49448 558 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 HTR6P50406 440 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 METAP2P50579 478 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 F2RL1P55085 397 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 DSC1Q08554 894 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 LMOD3Q0VAK6 560 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 C6orf141Q5SZD1 244 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 TYW3Q6IPR3 259 aaKnown RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 DHX57Q6P158 1386 aaKnown RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 C8orf82Q6P1X6 216 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 IKBIPQ70UQ0 350 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 PBRM1Q86U86 1689 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 FOXRED2Q8IWF2 684 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 ARHGAP12Q8IWW6 846 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 CCDC13Q8IYE1 715 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 OR14A16Q8NHC5 309 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 IGSF8Q969P0 613 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 NAF1Q96HR8 494 aaKnown RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 TXNDC15Q96J42 360 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 HAUS8Q9BT25 410 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 GPR108Q9NPR9 543 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 TBC1D22BQ9NU19 505 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 SEPT11Q9NVA2 429 aaKnown RBP4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 EHD2Q9NZN4 543 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 MRC2Q9UBG0 1479 aa4.59□□□□□ -1.67
HMGB3P6-201ENST00000444896 TARBP1Q13395 1621 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 CPED1A4D0V7 1026 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 INSIG1O15503 277 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 NKX2-2O95096 273 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 G6PDP11413 515 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZNF12P17014 697 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 CDH2P19022 906 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 MAOAP21397 527 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 ARL3P36405 182 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 CLCN3P51790 818 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 NANOS2P60321 138 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 NIPAL4Q0D2K0 466 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 MAMLD1Q13495 774 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 KRT24Q2M2I5 525 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 EIF2S3LQ2VIR3 472 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 KLHL24Q6TFL4 600 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 GSTA5Q7RTV2 222 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 ZC3HC1Q86WB0 502 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 SPATA6LQ8N4H0 392 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 PDILTQ8N807 584 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 TREX2Q9BQ50 279 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 TMEM47Q9BQJ4 181 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 NTPCRQ9BSD7 190 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 SPRY4Q9C004 299 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 PDZD7Q9H5P4 517 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 MMP25Q9NPA2 562 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 HINT3Q9NQE9 182 aaKnown RBP4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 HCFC1R1Q9NWW0 138 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 SLC9A2Q9UBY0 812 aa4.58□□□□□ -1.68
HMGB3P6-201ENST00000444896 RCOR1Q9UKL0 485 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms