RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SPPL3Q8TCT6 385 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 ANKRD9Q96BM1 317 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-205ENST00000433888 SLC39A13Q96H72 371 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 RCOR1Q9UKL0 485 aa3.6□□□□□ -1.83
PTPN4-205ENST00000433888 CTAGE9A4FU28 777 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 VWA3AA6NCI4 1184 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 GOLGA6L9A6NEM1 432 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CYC1P08574 325 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 WEE2P0C1S8 567 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CTAGE8P0CG41 777 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 G6PDP11413 515 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 MYOD1P15172 320 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 RXRAP19793 462 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 DCTP40126 519 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 HSD17B4P51659 736 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 RAD23BP54727 409 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 HNRNPH2P55795 449 aaKnown RBP3.59□□□□□ -1.83
PTPN4-205ENST00000433888 GRIK3Q13003 919 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 KRT24Q2M2I5 525 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 EIF2S3LQ2VIR3 472 aaKnown RBP3.59□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF876PQ49A33 203 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CCNYL2Q5T2Q4 361 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 LRRC8EQ6NSJ5 796 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CCDC174Q6PII3 467 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 KCTD8Q6ZWB6 473 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CTAGE4Q8IX94 777 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CADM4Q8NFZ8 388 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 TRIM58Q8NG06 486 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 OR10V1Q8NGI7 309 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 ZNF570Q96NI8 536 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 MOV10L1Q9BXT6 1211 aaKnown RBP3.59□□□□□ -1.83
PTPN4-205ENST00000433888 SUFUQ9UMX1 484 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 CARD8Q9Y2G2 431 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 RRP7AQ9Y3A4 280 aaKnown RBP3.59□□□□□ -1.83
PTPN4-205ENST00000433888 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.83
PTPN4-205ENST00000433888 MAOAP21397 527 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 CORO1AP31146 461 aaKnown RBP3.58□□□□□ -1.84
PTPN4-205ENST00000433888 SLC35E4Q6ICL7 350 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 RGMBQ6NW40 437 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 SLC36A4Q6YBV0 504 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 ASB18Q6ZVZ8 466 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 FTSJ3Q8IY81 847 aaKnown RBP3.58□□□□□ -1.84
PTPN4-205ENST00000433888 DSELQ8IZU8 1212 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 LSM14AQ8ND56 463 aaKnown RBP3.58□□□□□ -1.84
PTPN4-205ENST00000433888 OR2AK2Q8NG84 335 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 CEP70Q8NHQ1 597 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 TRAPPC12Q8WVT3 735 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 FBXL8Q96CD0 374 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 ZNF583Q96ND8 569 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 CD180Q99467 661 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 TAOK3Q9H2K8 898 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 MROH8Q9H579 483 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 FKRPQ9H9S5 495 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 MMP25Q9NPA2 562 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPN4-205ENST00000433888 AMDHD2Q9Y303 409 aa3.58□□□□□ -1.84
PTPN4-205ENST00000433888 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 PEX12O00623 359 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 KLK10O43240 276 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 SHMT1P34896 483 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 NAA25Q14CX7 972 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 C2orf68Q2NKX9 166 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 ZNF667Q5HYK9 610 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 LINGO2Q7L985 606 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 CNBD1Q8NA66 436 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 ADAD2Q8NCV1 583 aaKnown RBP3.57□□□□□ -1.84
PTPN4-205ENST00000433888 BEST2Q8NFU1 509 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 LTV1Q96GA3 475 aaPredicted RBP3.57□□□□□ -1.84
PTPN4-205ENST00000433888 ZNF599Q96NL3 588 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 PCYT2Q99447 389 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 SYT17Q9BSW7 474 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 NOD2Q9HC29 1040 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 SNTG1Q9NSN8 517 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 FAM118AQ9NWS6 357 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 BABAM1Q9NWV8 329 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 TMEM160Q9NX00 188 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.57□□□□□ -1.84
PTPN4-205ENST00000433888 KIAA1456Q9P272 454 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 DLGAP4Q9Y2H0 992 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
PTPN4-205ENST00000433888 HEXAP06865 529 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
PTPN4-205ENST00000433888 MMP14P50281 582 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 METAP2P50579 478 aaKnown RBP eCLIP3.56□□□□□ -1.84
PTPN4-205ENST00000433888 ISL1P61371 349 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 GNB1P62873 340 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 TBL3Q12788 808 aaKnown RBP3.56□□□□□ -1.84
PTPN4-205ENST00000433888 GTF2H2Q13888 395 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 LPAL2Q16609 132 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 GPATCH4Q5T3I0 446 aaKnown RBP3.56□□□□□ -1.84
PTPN4-205ENST00000433888 GTF2H2CQ6P1K8 395 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 SLC27A1Q6PCB7 646 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 CEACAM20Q6UY09 585 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 SLC35F3Q8IY50 421 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 USP38Q8NB14 1042 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 SIN3AQ96ST3 1273 aa3.56□□□□□ -1.84
PTPN4-205ENST00000433888 FAM167BQ9BTA0 163 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms