RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
CDK12-201ENST00000430627 GLOD4Q9HC38 313 aa13.34□□□□□ -0.27
CDK12-201ENST00000430627 PDE7BQ9NP56 450 aa13.34□□□□□ -0.27
CDK12-201ENST00000430627 PCDHB10Q9UN67 800 aa13.34□□□□□ -0.27
CDK12-201ENST00000430627 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
CDK12-201ENST00000430627 DLG4P78352 724 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 NR1D2Q14995 579 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 ZMYND11Q15326 602 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 PLPPR4Q7Z2D5 763 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 LIX1LQ8IVB5 337 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 NLGN4YQ8NFZ3 816 aaPredicted RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 SMG9Q9H0W8 520 aaKnown RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 MEN1O00255 615 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 HCAR3P49019 387 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 CDH13P55290 713 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 VARS2Q5ST30 1063 aaKnown RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 WLSQ5T9L3 541 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 KLHDC7AQ5VTJ3 777 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 RIPOR1Q6ZS17 1223 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 SEPHS2Q99611 448 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 COMMD8Q9NX08 183 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 VPS4AQ9UN37 437 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 TBL1XR1Q9BZK7 514 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 DNM1LO00429 736 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 DEAF1O75398 565 aaPredicted RBP13.33□□□□□ -0.28
CDK12-201ENST00000430627 FGFR3P22607 806 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 TTPAP49638 278 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 MBTD1Q05BQ5 628 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 HEXDCQ8WVB3 486 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 EXD2Q9NVH0 621 aa13.33□□□□□ -0.28
CDK12-201ENST00000430627 ASTN2O75129 1339 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 C15orf38-AP3S2A0A0A6YYH1 394 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 TCP11X1B4DZS4 312 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 KLHL2O95198 593 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 COL6A1P12109 1028 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 OMPP47874 163 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 PXNP49023 591 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 GCNT1Q02742 428 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 KHDC1LQ5JSQ8 128 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SH3PXD2AQ5TCZ1 1133 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 RELL1Q8IUW5 271 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 MFSD14AQ96MC6 490 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 FNDC11Q9BVV2 318 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 OR2AG1Q9H205 316 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 TOR4AQ9NXH8 423 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 ASNA1O43681 348 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 TRIM40Q6P9F5 258 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 TMEM220Q6QAJ8 160 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 CATSPER1Q8NEC5 780 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 DTX3LQ8TDB6 740 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 FBXL18Q96ME1 805 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 LMAN1LQ9HAT1 526 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 ACOT7O00154 380 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 CLDN11O75508 207 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 ZNF37AP17032 561 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 PCBP1Q15365 356 aaKnown RBP eCLIP13.32□□□□□ -0.282e-6■□□□□ 10.4
CDK12-201ENST00000430627 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 FIP1L1Q6UN15 594 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 MON1AQ86VX9 555 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 CCNJLQ8IV13 435 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 NETO2Q8NC67 525 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 ALG2Q9H553 416 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 AGLP35573 1532 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 MAGEB16A2A368 324 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SAC3D1A6NKF1 404 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 GMFBP60983 142 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SHQ1Q6PI26 577 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 GTPBP3Q969Y2 492 aaKnown RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 WDR77Q9BQA1 342 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 ALG9Q9H6U8 611 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 ITGB1BP2Q9UKP3 347 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 SNX7Q9UNH6 387 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 TTC34A8MYJ7 566 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
CDK12-201ENST00000430627 KMOO15229 486 aa13.32□□□□□ -0.28
CDK12-201ENST00000430627 CDKN1CP49918 316 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms