RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 SAGE1Q9NXZ1 904 aa3.3□□□□□ -1.88
TIMM9P3-201ENST00000428659 SUFUQ9UMX1 484 aa3.3□□□□□ -1.88
TIMM9P3-201ENST00000428659 CARD8Q9Y2G2 431 aa3.3□□□□□ -1.88
TIMM9P3-201ENST00000428659 A0A1W2PQM1 296 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 P2RY10O00398 339 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 HNRNPA1P09651 372 aaKnown RBP eCLIP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 CHATP28329 748 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 NEDD9Q14511 834 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 VEPH1Q14D04 833 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 ALG11Q2TAA5 492 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 COL28A1Q2UY09 1125 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 SLC9C2Q5TAH2 1124 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 CYP26C1Q6V0L0 522 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 RAD9BQ6WBX8 426 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 TAOK1Q7L7X3 1001 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 SPATA6LQ8N4H0 392 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 ZCCHC9Q8N567 271 aaKnown RBP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 ANKRD42Q8N9B4 389 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 OR13A1Q8NGR1 328 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 USP13Q92995 863 aaPredicted RBP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 FBXL8Q96CD0 374 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 KLHL15Q96M94 604 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 CMKLR1Q99788 373 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 KXD1Q9BQD3 176 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 FUZQ9BT04 418 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 GPR63Q9BZJ6 419 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 INTS2Q9H0H0 1204 aaKnown RBP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 C17orf75Q9HAS0 396 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 FBXO9Q9UK97 447 aaPredicted RBP3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 PADI3Q9ULW8 664 aa3.29□□□□□ -1.88
TIMM9P3-201ENST00000428659 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 SMCHD1A6NHR9 2005 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 GOLGA6L10A0A0M3HER8 536 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 TMEM202A6NGA9 273 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 IFRD1O00458 451 aaPredicted RBP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 SLC22A3O75751 556 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 TFP02787 698 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 PCNAP12004 261 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 MAOAP21397 527 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 HNRNPH2P55795 449 aaKnown RBP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 GALNT2Q10471 571 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 DMP1Q13316 513 aaPredicted RBP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 PPP2R5BQ15173 497 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 PPP6R3Q5H9R7 873 aaPredicted RBP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 RGMBQ6NW40 437 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 NEK10Q6ZWH5 1172 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 SFR1Q86XK3 245 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 LMNTD1Q8N9Z9 388 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 TNIP2Q8NFZ5 429 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 HUS1BQ8NHY5 278 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 GRAMD2BQ96HH9 432 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 USP44Q9H0E7 712 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 PPP1R3EQ9H7J1 279 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 GPR108Q9NPR9 543 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 PCDHB16Q9NRJ7 776 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 BEX4Q9NWD9 120 aaPredicted RBP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 GAB2Q9UQC2 676 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 VDAC3Q9Y277 283 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 FAM96BQ9Y3D0 163 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 OR2W1Q9Y3N9 320 aa3.28□□□□□ -1.88
TIMM9P3-201ENST00000428659 ASPDHA6ND91 283 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 C16orf97H3BN30 126 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 TAF4O00268 1085 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 TNPO2O14787 897 aaKnown RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 ZG16O60844 167 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 MT-CYBP00156 380 aaPredicted RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 PYGLP06737 847 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 GPTP24298 496 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 METAP2P50579 478 aaKnown RBP eCLIP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 HILS1P60008 231 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 SORDQ00796 357 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 PRICKLE4Q2TBC4 344 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 C14orf177Q52M58 125 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 GPATCH4Q5T3I0 446 aaKnown RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 CPLX2Q6PUV4 134 aaKnown RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 GDPD4Q6W3E5 623 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 LRRC8DQ7L1W4 858 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 LINGO2Q7L985 606 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 BEST3Q8N1M1 668 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 SCCPDHQ8NBX0 429 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 BEST2Q8NFU1 509 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 OR5R1Q8NH85 324 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 HVCN1Q96D96 273 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 APOPT1Q96IL0 206 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 NEUROD6Q96NK8 337 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 NDST4Q9H3R1 872 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 SEBOXQ9HB31 216 aaPredicted RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 PCDH9Q9HC56 1237 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 HINT3Q9NQE9 182 aaKnown RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 CNOT7Q9UIV1 285 aaKnown RBP3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 PADI1Q9ULC6 663 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 CEPT1Q9Y6K0 416 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 DGKBQ9Y6T7 804 aa3.27□□□□□ -1.89
TIMM9P3-201ENST00000428659 TEX13CA0A0J9YWL9 993 aa3.26□□□□□ -1.89
TIMM9P3-201ENST00000428659 SEC14L5O43304 696 aa3.26□□□□□ -1.89
TIMM9P3-201ENST00000428659 MLYCDO95822 493 aa3.26□□□□□ -1.89
TIMM9P3-201ENST00000428659 CGAP01215 116 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms