RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 SLC10A7Q0GE19 358 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ARHGEF7Q14155 803 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ZNF235Q14590 738 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 NR1D2Q14995 579 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ACOX1Q15067 660 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 FILIP1LQ4L180 1135 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 KCTD16Q68DU8 428 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ARHGAP36Q6ZRI8 547 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ZNF571Q7Z3V5 609 aaPredicted RBP17.43■□□□□ 0.38
DDR1-235ENST00000428153 LRRC49Q8IUZ0 686 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 AOPEPQ8N6M6 819 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 NUS1Q96E22 293 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 MGME1Q9BQP7 344 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 LGR4Q9BXB1 951 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 ISCUQ9H1K1 167 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 CYP4F12Q9HCS2 524 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 LRIT1Q9P2V4 623 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 PHTF1Q9UMS5 762 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 LOXL2Q9Y4K0 774 aa17.43■□□□□ 0.38
DDR1-235ENST00000428153 SMTNL1A8MU46 457 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 B8ZZF3 427 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 J3QKU1 62 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 DDX3XO00571 662 aaKnown RBP eCLIP17.42■□□□□ 0.384e-8■■■■■ 37
DDR1-235ENST00000428153 HEXIM1O94992 359 aaKnown RBP17.42■□□□□ 0.38
DDR1-235ENST00000428153 PEX11BO96011 259 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 CYP2A6P11509 494 aaPredicted RBP17.42■□□□□ 0.38
DDR1-235ENST00000428153 CCNB1P14635 433 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 VIPR1P32241 457 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 SERPINB6P35237 376 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 TYRO3Q06418 890 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 KLHL30Q0D2K2 578 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 CNGA3Q16281 694 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 ZSCAN23Q3MJ62 389 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 NYAP1Q6ZVC0 841 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 ZNF438Q7Z4V0 828 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 POLNQ7Z5Q5 900 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 SLITRK4Q8IW52 837 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 ZNF653Q96CK0 615 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 DTD2Q96FN9 168 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 SCRN2Q96FV2 425 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 MCCC1Q96RQ3 725 aaPredicted RBP17.42■□□□□ 0.38
DDR1-235ENST00000428153 GSDMCQ9BYG8 508 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 TRIM7Q9C029 511 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 DPEP2Q9H4A9 486 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 MRPL40Q9NQ50 206 aaKnown RBP17.42■□□□□ 0.38
DDR1-235ENST00000428153 SEPT10Q9P0V9 454 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 PPIL1Q9Y3C6 166 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 RNF215Q9Y6U7 377 aa17.42■□□□□ 0.38
DDR1-235ENST00000428153 TLN1Q9Y490 2541 aaKnown RBP17.42■□□□□ 0.38
DDR1-235ENST00000428153 MAFKO60675 156 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 CPNE6O95741 557 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 CPP00450 1065 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 ITGB2P05107 769 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 GPR3P46089 330 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 CDH6P55285 790 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 B4GALNT1Q00973 533 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 DPTQ07507 201 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 ILF3Q12906 894 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDR1-235ENST00000428153 PIGHQ14442 188 aaPredicted RBP17.41■□□□□ 0.38
DDR1-235ENST00000428153 TCEA2Q15560 299 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 FIGNQ5HY92 759 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 JAMLQ86YT9 394 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 NSMCE1Q8WV22 266 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 TEKT4Q8WW24 435 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 FRMD8Q9BZ67 464 aaPredicted RBP17.41■□□□□ 0.38
DDR1-235ENST00000428153 SEMA4CQ9C0C4 833 aa17.41■□□□□ 0.38
DDR1-235ENST00000428153 AKAP7Q9P0M2 348 aaPredicted RBP17.41■□□□□ 0.38
DDR1-235ENST00000428153 B4DGG1 531 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.4■□□□□ 0.38
DDR1-235ENST00000428153 EFSO43281 561 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 CEACAM5P06731 702 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 KRT10P13645 584 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 IL1R2P27930 398 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 LY6DQ14210 128 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 KIAA1614Q5VZ46 1190 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 PIM3Q86V86 326 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 NLRP8Q86W28 1048 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 HEATR4Q86WZ0 1026 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 RAVER1Q8IY67 606 aaKnown RBP17.4■□□□□ 0.38
DDR1-235ENST00000428153 PELI3Q8N2H9 469 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 NIPA2Q8N8Q9 360 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 Q8N9G6 341 aaPredicted RBP17.4■□□□□ 0.38
DDR1-235ENST00000428153 SGF29Q96ES7 293 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 CSPG4P5Q96PW8 444 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDR1-235ENST00000428153 CARS2Q9HA77 564 aaKnown RBP17.4■□□□□ 0.38
DDR1-235ENST00000428153 RCOR3Q9P2K3 495 aaPredicted RBP17.4■□□□□ 0.38
DDR1-235ENST00000428153 PISDQ9UG56 409 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 SLC17A4Q9Y2C5 497 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 PCDHGC4Q9Y5F7 938 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 MYO18BQ8IUG5 2567 aa17.4■□□□□ 0.38
DDR1-235ENST00000428153 A0A1B0GTH6 734 aa17.39■□□□□ 0.37
DDR1-235ENST00000428153 HGSO14964 777 aaPredicted RBP17.39■□□□□ 0.37
DDR1-235ENST00000428153 PYGLP06737 847 aa17.39■□□□□ 0.37
DDR1-235ENST00000428153 IVLP07476 585 aa17.39■□□□□ 0.37
DDR1-235ENST00000428153 HGFP14210 728 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms