RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CCDC91Q7Z6B0 441 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 GPATCH11Q8N954 259 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 OR2A12Q8NGT7 310 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 WFIKKN2Q8TEU8 576 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 FRS2Q8WU20 508 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 ZNF641Q96N77 438 aaPredicted RBP15.21■□□□□ 0.03
ACTB-204ENST00000425660 TCF12Q99081 682 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 MECRQ9BV79 373 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 INTS10Q9NVR2 710 aaKnown RBP15.21■□□□□ 0.03
ACTB-204ENST00000425660 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
ACTB-204ENST00000425660 COPG2Q9UBF2 871 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 CDH22Q9UJ99 828 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 CDH7Q9ULB5 785 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 ERVW-1Q9UQF0 538 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 ACOT9Q9Y305 439 aa15.21■□□□□ 0.03
ACTB-204ENST00000425660 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.03
ACTB-204ENST00000425660 CAPN8A6NHC0 703 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PHGDHO43175 533 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 GMPRP36959 345 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 FCHO2Q0JRZ9 810 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PCLAFQ15004 111 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PTPRRQ15256 657 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 GAB4Q2WGN9 574 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 GLIPR1L2Q4G1C9 344 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 RBM20Q5T481 1227 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 DPY19L3Q6ZPD9 716 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 OTOAQ7RTW8 1153 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 SDCCAG8Q86SQ7 713 aaPredicted RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 C12orf40Q86WS4 652 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ZSWIM9Q86XI8 627 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 NUDCD3Q8IVD9 361 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 CENPLQ8N0S6 344 aaPredicted RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 OTUD6BQ8N6M0 293 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ELMO2Q96JJ3 720 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ZNF358Q9NW07 568 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 PRRC2BQ5JSZ5 2229 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 A0A1W2PQ67 120 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 STX7O15400 261 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 TULP3O75386 442 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 WISP3O95389 354 aaPredicted RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 ASLP04424 464 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 SRPRAP08240 638 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 ALPIP09923 528 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ARSAP15289 507 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PEX6Q13608 980 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PTPRNQ16849 979 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 ACCSLQ4AC99 568 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 FASTKD1Q53R41 847 aaKnown RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 Q6ZVU0 165 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 LDB1Q86U70 411 aaPredicted RBP15.2■□□□□ 0.02
ACTB-204ENST00000425660 TMEM151AQ8N4L1 468 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 E2F7Q96AV8 911 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 TSPAN17Q96FV3 270 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 OLFM1Q99784 485 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 SUV39H2Q9H5I1 410 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 NMRAL1Q9HBL8 299 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 VWA7Q9Y334 891 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 PKP3Q9Y446 797 aa15.2■□□□□ 0.02
ACTB-204ENST00000425660 A0A087X1B8 175 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 OTOL1A6NHN0 477 aaPredicted RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 TGDSO95455 350 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ATP5BP06576 529 aaKnown RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 APOA4P06727 396 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 DLDP09622 509 aaKnown RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 BMP1P13497 986 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 CTPS1P17812 591 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 SAT1P21673 171 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 SLC26A3P40879 764 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 SLC12A2P55011 1212 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 XIAPP98170 497 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 RAD51Q06609 339 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ADAM15Q13444 863 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 HECTD2Q5U5R9 776 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ATG16L1Q676U5 607 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 FAM45BPQ6NSW5 357 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 LYSMD3Q7Z3D4 306 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 YTHDF3Q7Z739 585 aaKnown RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 RYBPQ8N488 228 aaPredicted RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 PNPLA1Q8N8W4 532 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 CCDC63Q8NA47 563 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 OR6Y1Q8NGX8 325 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 FAM45AQ8TCE6 357 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 SCRN2Q96FV2 425 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 C7orf26Q96N11 449 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 GPR78Q96P69 363 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 MCCC1Q96RQ3 725 aaPredicted RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 NDNQ99608 321 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 PRO3102Q9H379 93 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 EBF3Q9H4W6 596 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ECT2Q9H8V3 914 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ZFYVE1Q9HBF4 777 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 ZFP14Q9HCL3 533 aa15.19■□□□□ 0.02
ACTB-204ENST00000425660 THG1LQ9NWX6 298 aaKnown RBP15.19■□□□□ 0.02
ACTB-204ENST00000425660 FKBPLQ9UIM3 349 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms