RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
HDLBP-206ENST00000417540 APOLD1Q96LR9 279 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 AGAP3Q96P47 875 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 QKIQ96PU8 341 aaKnown RBP eCLIP10.24□□□□□ -0.777e-7■□□□□ 9.5
HDLBP-206ENST00000417540 IL12RB2Q99665 862 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 BAG1Q99933 345 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-206ENST00000417540 HEMGNQ9BXL5 484 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 GOLGA6AQ9NYA3 693 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 DONSONQ9NYP3 566 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 UBP1Q9NZI7 540 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 SIRPGQ9P1W8 387 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 NEUROG3Q9Y4Z2 214 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 PCDHB1Q9Y5F3 818 aa10.24□□□□□ -0.77
HDLBP-206ENST00000417540 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-206ENST00000417540 ATMQ13315 3056 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 A0A0A6YYK5 440 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 A0A0J9YYE9 177 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 AQP9O43315 295 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 TRBC1P01850 177 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 TSHRP16473 764 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 NFKB1P19838 968 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 HNF1BP35680 557 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 CHRNA4P43681 627 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 RENBPP51606 427 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 THOP1P52888 689 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 PDX1P52945 283 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 NSUN2Q08J23 767 aaKnown RBP eCLIP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 CCDC15Q0P6D6 951 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 WASHC5Q12768 1159 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 MTM1Q13496 603 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 HNRNPDQ14103 355 aaKnown RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 GRM3Q14832 879 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 SPA17Q15506 151 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 CDKN3Q16667 212 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 QPCTQ16769 361 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 LRRC38Q5VT99 294 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 TIGD7Q6NT04 549 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 Q6ZVL8 140 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ZC3H18Q86VM9 953 aaKnown RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 HID1Q8IV36 788 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 SLC35F3Q8IY50 421 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 NSMCE1Q8WV22 266 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 SCAMP4Q969E2 229 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 SKA1Q96BD8 255 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 EID2BQ96D98 161 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ZNF830Q96NB3 372 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 TSGA13Q96PP4 275 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 TRIB3Q96RU7 358 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 APOOQ9BUR5 198 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ARFGAP3Q9NP61 516 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 KLQ9UEF7 1012 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ZMIZ1Q9ULJ6 1067 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 SPO11Q9Y5K1 396 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 ST14Q9Y5Y6 855 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 HS3ST3A1Q9Y663 406 aa10.23□□□□□ -0.77
HDLBP-206ENST00000417540 OAS3Q9Y6K5 1087 aaKnown RBP10.23□□□□□ -0.77
HDLBP-206ENST00000417540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 TCRBV7S2A1N4TA0A589 114 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 FADS2P1A8MWK0 482 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 MAGEC1O60732 1142 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 FUCA1P04066 466 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 PROS1P07225 676 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 MX2P20592 715 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 CCNCP24863 283 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 SLC1A1P43005 524 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 POLD2P49005 469 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 STC1P52823 247 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 KIAA1024LP59773 190 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 DAB2P98082 770 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 CDK3Q00526 305 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 ENPP7Q6UWV6 458 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 USP45Q70EL2 814 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 LYSMD3Q7Z3D4 306 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 RD3Q7Z3Z2 195 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 BBS5Q8N3I7 341 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 ASB12Q8WXK4 309 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 SPOCK2Q92563 424 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 OXNAD1Q96HP4 312 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 WDR24Q96S15 920 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 CDC6Q99741 560 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 ABCG8Q9H221 673 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 WDR26Q9H7D7 661 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 PCDH9Q9HC56 1237 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 DDX56Q9NY93 547 aaKnown RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 NLGN3Q9NZ94 848 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 APOBEC2Q9Y235 224 aaKnown RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 R3HDM2Q9Y2K5 976 aaKnown RBP10.22□□□□□ -0.77
HDLBP-206ENST00000417540 PLEKHM1Q9Y4G2 1056 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 FAM208BQ5VWN6 2430 aa10.22□□□□□ -0.77
HDLBP-206ENST00000417540 ZFYVE26Q68DK2 2539 aa10.21□□□□□ -0.77
HDLBP-206ENST00000417540 C1orf232A0A0U1RR37 186 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms