RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 THBS1P07996 1170 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP3A4P08684 503 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RPSAP08865 295 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 C8orf89P0DMQ9 161 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 BMP2P12643 396 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CHN1P15882 459 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TCF4P15884 667 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 NCF2P19878 526 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CPN2P22792 545 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ITGA3P26006 1051 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 POU1F1P28069 291 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PTPN6P29350 595 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FRKP42685 505 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SYKP43405 635 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC6A9P48067 706 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ALDH7A1P49419 539 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GATMP50440 423 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CCT8P50990 548 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 OAZ1P54368 228 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 UCP2P55851 309 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PCBP3P57721 371 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 UBE2HP62256 183 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 EFNB1P98172 346 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PDE1BQ01064 536 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PTH1RQ03431 593 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ABHD18Q0P651 414 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SRSF5Q13243 272 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GNA13Q14344 377 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 USP10Q14694 798 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LARS2Q15031 903 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PDK3Q15120 406 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ANGPT1Q15389 498 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 NPY5RQ15761 445 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SNAPC1Q16533 368 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SMTNL2Q2TAL5 461 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 MST1LQ2TV78 715 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CCDC14Q49A88 953 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 NKAIN1Q4KMZ8 207 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PABPC1LQ4VXU2 614 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GPAT3Q53EU6 434 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RUNDC3AQ59EK9 446 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RTP2Q5QGT7 225 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 DCST1Q5T197 706 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LCE2CQ5TA81 110 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CACHD1Q5VU97 1274 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PRAMEF18Q5VWM3 479 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ATL3Q6DD88 541 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FCRL6Q6DN72 434 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PTRHD1Q6GMV3 140 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GRAMD4Q6IC98 578 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 KIAA0930Q6ICG6 404 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TREML4Q6UXN2 200 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CLEC9AQ6UXN8 241 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GLDNQ6ZMI3 551 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LEKR1Q6ZMV7 388 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 BEND4Q6ZU67 534 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PHLDB2Q86SQ0 1253 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TPRA1Q86W33 373 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SIAH3Q8IW03 269 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 DHX40Q8IX18 779 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC56Q8IYG6 542 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SMYD4Q8IYR2 804 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LILRA2Q8N149 483 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PQLC1Q8N2U9 271 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GUF1Q8N442 669 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 COMMD1Q8N668 190 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 NECAB1Q8N987 351 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF565Q8N9K5 539 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 C11orf65Q8NCR3 313 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF397Q8NF99 534 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 DNAJB14Q8TBM8 379 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC2A12Q8TD20 617 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC8CQ8TDW0 803 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CCDC12Q8WUD4 166 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PTPMT1Q8WUK0 201 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TSEN15Q8WW01 171 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RLN3Q8WXF3 142 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 AZIN2Q96A70 460 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TMIGD2Q96BF3 282 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SHISA4Q96DD7 197 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 REXO5Q96IC2 774 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 MAP6Q96JE9 813 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC41A2Q96JW4 573 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF558Q96NG5 402 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PLEKHG4BQ96PX9 1271 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PSKH2Q96QS6 385 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PCDHB18PQ96TA0 734 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LLPHQ9BRT6 129 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HAUS8Q9BT25 410 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 NUSAP1Q9BXS6 441 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HDAC8Q9BY41 377 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PITHD1Q9GZP4 211 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 EPB41L4BQ9H329 900 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CENPHQ9H3R5 247 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC19Q9H756 370 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RPF1Q9H9Y2 349 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 KCNK9Q9NPC2 374 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP13A2Q9NQ11 1180 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CHRAC1Q9NRG0 131 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LANCL2Q9NS86 450 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms