RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MFN2O95140 757 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CASP2P42575 452 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 MAGEA12P43365 314 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 STX1BP61266 288 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ECT2LQ008S8 904 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CLEC6AQ6EIG7 209 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 GTF2IRD2BQ6EKJ0 949 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 USP50Q70EL3 339 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 GTF2IRD2Q86UP8 949 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 P2RY11Q96G91 374 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPATA33Q96N06 139 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 C17orf80Q9BSJ5 609 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 B3GNT5Q9BYG0 378 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 TNFRSF12AQ9NP84 129 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 CNGB3Q9NQW8 809 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 VANGL2Q9ULK5 521 aa14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 MAGED1Q9Y5V3 778 aaPredicted RBP14.74□□□□□ -0.05
NCKIPSD-204ENST00000416649 ARPC2O15144 300 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 AXIN1O15169 862 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 INMTO95050 263 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 CYP3A5P20815 502 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 GJA9P57773 515 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PHC1P78364 1004 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 ARMC8Q8IUR7 673 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 ADGRG5Q8IZF4 528 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPARTQ8N0X7 666 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 SCML4Q8N228 414 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 TTC30BQ8N4P2 665 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 C12orf29Q8N999 325 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PNPT1Q8TCS8 783 aaKnown RBP14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 HDAC11Q96DB2 347 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 XYLT2Q9H1B5 865 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 KLHL8Q9P2G9 620 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 GIMAP2Q9UG22 337 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 H0Y858 1186 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 LDLRP01130 860 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 TXNP10599 105 aaKnown RBP14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PCNAP12004 261 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRPC1P48995 793 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 LAMC2Q13753 1193 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.73□□□□□ -0.053e-7■■■■■ 27
NCKIPSD-204ENST00000416649 XRRA1Q6P2D8 792 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PELI3Q8N2H9 469 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 ELMOD1Q8N336 334 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 TMEM151AQ8N4L1 468 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 POC5Q8NA72 575 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 MINDY2Q8NBR6 621 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 TRPV3Q8NET8 790 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 NDNFQ8TB73 568 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 DNAJB14Q8TBM8 379 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 S100ZQ8WXG8 99 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PHF21BQ96EK2 531 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 RRAGCQ9HB90 399 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 PDLIM7Q9NR12 457 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 DDX28Q9NUL7 540 aaKnown RBP14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 UBP1Q9NZI7 540 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 GINS2Q9Y248 185 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 MTF2Q9Y483 593 aaPredicted RBP14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 GPSM3Q9Y4H4 160 aa14.73□□□□□ -0.05
NCKIPSD-204ENST00000416649 IDH3BO43837 385 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 UGT2B4P06133 528 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CDH1P12830 882 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 AXLP30530 894 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 HK2P52789 917 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 LRIT3Q3SXY7 679 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CATSPER4Q7RTX7 472 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 SPRED1Q7Z699 444 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 LINC00523Q86TU6 105 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 TXNDC5Q8NBS9 432 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 TMEM176AQ96HP8 235 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 RNF145Q96MT1 663 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CSPG4P5Q96PW8 444 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 EXD2Q9NVH0 621 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 SNX5Q9Y5X3 404 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CCL15-CCL14A0A0B4J2E2 113 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 PDHXO00330 501 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CXCL11O14625 94 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 MFSD11O43934 449 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 NUAK1O60285 661 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 MGEA5O60502 916 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 VBP1P61758 197 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 TUBA3CQ13748 450 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 CCL15Q16663 113 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 GEN1Q17RS7 908 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZNF280DQ6N043 979 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 SMG8Q8ND04 991 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 STYXQ8WUJ0 223 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 MAGED4Q96JG8 741 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 MYRFLQ96LU7 910 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 PNMA8BQ9ULN7 279 aaPredicted RBP14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 PRELID1Q9Y255 219 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 ACOT9Q9Y305 439 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 BPTFQ12830 3046 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 PAPPA2Q9BXP8 1791 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 ZFC3H1O60293 1989 aaKnown RBP14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 AQP12BA6NM10 295 aa14.72□□□□□ -0.05
NCKIPSD-204ENST00000416649 ANGPT2O15123 496 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms