RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 MEAF6Q9HAF1 191 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 STK39Q9UEW8 545 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SPO11Q9Y5K1 396 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 BACE2Q9Y5Z0 518 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SCN5AQ14524 2016 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 INSIG1O15503 277 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
HCG18-233ENST00000412685 SEC24AO95486 1093 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 CRTAMO95727 393 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 EFEMP2O95967 443 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 PENKP01210 267 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 CD1DP15813 335 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SUOXP51687 545 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 IZUMO2Q6UXV1 221 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 BNC2Q6ZN30 1099 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 RNF111Q6ZNA4 994 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 FAM43BQ6ZT52 329 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 RMDN1Q96DB5 314 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 L3HYPDHQ96EM0 354 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 SERPINI1Q99574 410 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 POLR3BQ9NW08 1133 aaPredicted RBP16.48■□□□□ 0.23
HCG18-233ENST00000412685 PACSIN3Q9UKS6 424 aa16.48■□□□□ 0.23
HCG18-233ENST00000412685 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 ILVBLA1L0T0 632 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 UBFD1O14562 309 aaKnown RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 RHOCP08134 193 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 ZNF37AP17032 561 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 CR2P20023 1033 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 ZNF140P52738 457 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 NFKB2Q00653 900 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 ZNF177Q13360 481 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 TYSND1Q2T9J0 566 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 ZNF678Q5SXM1 525 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 KIAA1841Q6NSI8 718 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 IRGCQ6NXR0 463 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 CHSY3Q70JA7 882 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 CDRT15Q96T59 188 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 EFCAB1Q9HAE3 211 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 POPDC3Q9HBV1 291 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 KIF3CO14782 793 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 SUPT7LO94864 414 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 UPP2O95045 317 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 PRSS56P0CW18 603 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 CCL23P55773 120 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 MRPS35P82673 323 aaKnown RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 DSG1Q02413 1049 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 RFTN1Q14699 578 aaPredicted RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 KBTBD6Q86V97 674 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 PGAM4Q8N0Y7 254 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 AARSD1Q9BTE6 412 aaKnown RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 AFF4Q9UHB7 1163 aaKnown RBP16.47■□□□□ 0.23
HCG18-233ENST00000412685 TRAF6Q9Y4K3 522 aa16.47■□□□□ 0.23
HCG18-233ENST00000412685 A0A1B0GVM2 712 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 TCAF2A6NFQ2 919 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CBX4O00257 560 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 SMIM24O75264 130 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 ENO3P13929 434 aaPredicted RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 ARSAP15289 507 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 PAX7P23759 505 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 HERVK_113P63132 956 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 ART3Q13508 389 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CHST9Q7L1S5 443 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 GLT6D1Q7Z4J2 308 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 OR4K2Q8NGD2 314 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 EXT2Q93063 718 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 ECSITQ9BQ95 431 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 ERVK-6Q9BXR3 956 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 WDR41Q9HAD4 459 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 INTS10Q9NVR2 710 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 VPS28Q9UK41 221 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 AGO1Q9UL18 857 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 ARIH1Q9Y4X5 557 aaPredicted RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 TSPAN3O60637 253 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 PRLP01236 227 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 IRF1P10914 325 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 TSPAN8P19075 237 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 THOP1P52888 689 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 INHBCP55103 352 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CDC16Q13042 620 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 UNC50Q53HI1 259 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 PIGGQ5H8A4 983 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 RNF168Q8IYW5 571 aaPredicted RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 UCMAQ8WVF2 138 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 TDRD1Q9BXT4 1180 aaKnown RBP16.46■□□□□ 0.23
HCG18-233ENST00000412685 RNF38Q9H0F5 515 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CWH43Q9H720 699 aa16.46■□□□□ 0.23
HCG18-233ENST00000412685 CCDC189A1A4V9 331 aa16.45■□□□□ 0.22
HCG18-233ENST00000412685 CFLARO15519 480 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms