RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FRG1Q14331 258 aaKnown RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 LONRF1Q17RB8 773 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 SKIDA1Q1XH10 827 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 PIP5KL1Q5T9C9 394 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 PPANQ9NQ55 473 aaKnown RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 NLE1Q9NVX2 485 aaPredicted RBP20.49■□□□□ 0.87
CHKB-201ENST00000406938 IL17CQ9P0M4 197 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 SERGEFQ9UGK8 458 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 GGT7Q9UJ14 662 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 NFS1Q9Y697 457 aa20.49■□□□□ 0.87
CHKB-201ENST00000406938 A0A1W2PP55 124 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 MAP2K7O14733 419 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 STX7O15400 261 aaKnown RBP20.48■□□□□ 0.87
CHKB-201ENST00000406938 VAPBO95292 243 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 DNTTP04053 509 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 NDUFV2P19404 249 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 SUOXP51687 545 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 RALGDSQ12967 914 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 KBTBD12Q3ZCT8 623 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 AGBL4Q5VU57 503 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 MICALCLQ6ZW33 695 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 SYT13Q7L8C5 426 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 KCNMB4Q86W47 210 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.48■□□□□ 0.87
CHKB-201ENST00000406938 PBXIP1Q96AQ6 731 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 MRGPRX1Q96LB2 322 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 VIPAS39Q9H9C1 493 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 BPIFA1Q9NP55 256 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 C20orf96Q9NUD7 363 aaPredicted RBP20.48■□□□□ 0.87
CHKB-201ENST00000406938 PKP3Q9Y446 797 aa20.48■□□□□ 0.87
CHKB-201ENST00000406938 EXOC1LA0A1B0GW35 172 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 AREL1O15033 823 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ATG13O75143 517 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 RPP40O75818 363 aaKnown RBP20.47■□□□□ 0.87
CHKB-201ENST00000406938 ERVK-10P10266 1014 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ZNF30P17039 623 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ARCN1P48444 511 aaKnown RBP20.47■□□□□ 0.87
CHKB-201ENST00000406938 IFFO1Q0D2I5 559 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ELP6Q0PNE2 266 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ARHGEF7Q14155 803 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 CYS1Q717R9 158 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 HDDC3Q8N4P3 179 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 HDAC10Q969S8 669 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 RAB7BQ96AH8 199 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 ZBTB9Q96C00 473 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 SIPA1Q96FS4 1042 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 CYTH2Q99418 400 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 OSBPL6Q9BZF3 934 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 SMYD2Q9NRG4 433 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 C2orf42Q9NWW7 574 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 BPTFQ12830 3046 aa20.47■□□□□ 0.87
CHKB-201ENST00000406938 FAM159BA6NKW6 160 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 GOLGA8KD6RF30 607 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 GOLGA8TH3BQL2 631 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 RNASEH2AO75792 299 aaKnown RBP20.46■□□□□ 0.87
CHKB-201ENST00000406938 C1SP09871 688 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 C7P10643 843 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 PSMA3P25788 255 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 DGKEP52429 567 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 PRAMEP78395 509 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 PTSQ03393 145 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 ZBTB16Q05516 673 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 MGAT5Q09328 741 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 STAT4Q14765 748 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 KLHL38Q2WGJ6 581 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 TTC31Q49AM3 519 aaPredicted RBP20.46■□□□□ 0.87
CHKB-201ENST00000406938 ALS2CLQ60I27 953 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 PDPK2PQ6A1A2 396 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 RASSF3Q86WH2 238 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 TBATAQ96M53 351 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 OMDQ99983 421 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 POLMQ9NP87 494 aaPredicted RBP20.46■□□□□ 0.87
CHKB-201ENST00000406938 SLC17A6Q9P2U8 582 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 SCML1Q9UN30 329 aa20.46■□□□□ 0.87
CHKB-201ENST00000406938 CXorf49A8MYA2 514 aaPredicted RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 ELFN1P0C7U0 828 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 GABRG2P18507 467 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 STC1P52823 247 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 EIF3BP55884 814 aaKnown RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 ZNF844Q08AG5 666 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 SIGLEC14Q08ET2 396 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 HSP90AA5PQ58FG0 334 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 ZNF449Q6P9G9 518 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 KIAA1324Q6UXG2 1013 aaKnown RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 LRIG3Q6UXM1 1119 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 GANCQ8TET4 914 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 HMGB4Q8WW32 186 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 CLDN23Q96B33 292 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 CDKN2AIPNLQ96HQ2 116 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 UHRF1Q96T88 793 aaPredicted RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 CCDC77Q9BR77 488 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 WRAP53Q9BUR4 548 aaKnown RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 CHRDQ9H2X0 955 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 SUDS3Q9H7L9 328 aaPredicted RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 FBXL12Q9NXK8 326 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 ZFATQ9P243 1243 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 FKBPLQ9UIM3 349 aa20.45■□□□□ 0.87
CHKB-201ENST00000406938 FNDC3AQ9Y2H6 1198 aaKnown RBP20.45■□□□□ 0.87
CHKB-201ENST00000406938 OR51F1A6NGY5 319 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms