RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SOX13Q9UN79 622 aa14.97□□□□□ -0.01
CAPN3-207ENST00000397200 MAGEB16A2A368 324 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 WASH3PC4AMC7 463 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 STK25O00506 426 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 KLF8O95600 359 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CHRM1P11229 460 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CHRNB1P11230 501 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 NTSR1P30989 418 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 MAGEA12P43365 314 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 SERPINB4P48594 390 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CCNHP51946 323 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 GEMP55040 296 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 MYLK3Q32MK0 819 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 ARMC3Q5W041 872 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 DPY19L3Q6ZPD9 716 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 LINC00523Q86TU6 105 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 SYNPOQ8N3V7 929 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 IL17RCQ8NAC3 791 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 TXNDC5Q8NBS9 432 aaKnown RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 OR2A12Q8NGT7 310 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 OR6K2Q8NGY2 324 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 SPATA22Q8NHS9 363 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 RPLP0P6Q8NHW5 317 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 PTPRN2Q92932 1015 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CPNE1Q99829 537 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 NOD2Q9HC29 1040 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 PIH1D1Q9NWS0 290 aaKnown RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 UBP1Q9NZI7 540 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 EVLQ9UI08 416 aaPredicted RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 AAR2Q9Y312 384 aaKnown RBP14.96□□□□□ -0.01
CAPN3-207ENST00000397200 USH1CQ9Y6N9 552 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 RPS6KL1Q9Y6S9 549 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 CAPN7Q9Y6W3 813 aa14.96□□□□□ -0.01
CAPN3-207ENST00000397200 FAM170BA6NMN3 283 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SYNCRIPO60506 623 aaKnown RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SIN3BO75182 1162 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 USP12O75317 370 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 UBOX5O94941 541 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 POP4O95707 220 aaKnown RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MT-CYBP00156 380 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MMP2P08253 660 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 GP5P40197 560 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SIGLEC14Q08ET2 396 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 CDH17Q12864 832 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MPP3Q13368 585 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SLC14A2Q15849 920 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 HSF5Q4G112 596 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ANKRD20A4Q4UJ75 823 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 NCEH1Q6PIU2 408 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ZNF687Q8N1G0 1237 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 RAB3IL1Q8TBN0 382 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ZNF669Q96BR6 464 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 HEPHQ9BQS7 1158 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MCMBPQ9BTE3 642 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 FOXQ1Q9C009 403 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ZDHHC6Q9H6R6 413 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MANSC1Q9H8J5 431 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 LMAN1LQ9HAT1 526 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SIRPGQ9P1W8 387 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MTF2Q9Y483 593 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 CKAP5Q14008 2032 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 DCXO43602 365 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 PMPCBO75439 489 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 TGDSO95455 350 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ALDOAP04075 364 aaKnown RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ADRA1AP35348 466 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 BNIP1Q12981 228 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ELAVL3Q14576 367 aaKnown RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 GRM3Q14832 879 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 STARD3Q14849 445 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SPDYAQ5MJ70 313 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 C9orf64Q5T6V5 341 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 GRTP1Q5TC63 336 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 MROH9Q5TGP6 573 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 RASSF3Q86WH2 238 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 FITM2Q8N6M3 262 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 CHST14Q8NCH0 376 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 OR8D1Q8WZ84 308 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 EDAQ92838 391 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 TUBGCP5Q96RT8 1024 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 GABRG3Q99928 467 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 KIFC1Q9BW19 673 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ATP13A3Q9H7F0 1226 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 ZFATQ9P243 1243 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 SLC17A6Q9P2U8 582 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 IL36AQ9UHA7 158 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 PSAT1Q9Y617 370 aa14.95□□□□□ -0.02
CAPN3-207ENST00000397200 BIRC5O15392 142 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 ITGA2BP08514 1039 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 HOXB2P14652 356 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 SERPINA4P29622 427 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 GKP32189 559 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 SKIV2L2P42285 1042 aaKnown RBP14.94□□□□□ -0.02
CAPN3-207ENST00000397200 BCL2L1Q07817 233 aa14.94□□□□□ -0.02
CAPN3-207ENST00000397200 SF3A3Q12874 501 aaKnown RBP eCLIP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms