RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CDKN2AIPNLQ96HQ2 116 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 PSKH2Q96QS6 385 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 NPAS2Q99743 824 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 DPPA5A6NC42 116 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF840PA6NDX5 716 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 EFEMP2O95967 443 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 XRCC1P18887 633 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 OR1D2P34982 312 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 CEACAM7Q14002 265 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 MRNIPQ6NTE8 343 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 SCLYQ96I15 445 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 FAR2Q96K12 515 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF512Q96ME7 567 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 MRPL9Q9BYD2 267 aaKnown RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 GKN1Q9NS71 199 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 MTRRQ9UBK8 725 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 UBA2Q9UBT2 640 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 SEPT3Q9UH03 358 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 VPS28Q9UK41 221 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 RIMKLBQ9ULI2 386 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 STX16-NPEPL1H3BU86 382 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 KDELR3O43731 214 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 SEC24AO95486 1093 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 HSPA1AP0DMV8 641 aaKnown RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 HSPA1BP0DMV9 641 aaKnown RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 CR2P20023 1033 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF140P52738 457 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 INHBCP55103 352 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 PKNOX1P55347 436 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 CLEC6AQ6EIG7 209 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 TMEM154Q6P9G4 183 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
TRIM39-205ENST00000396551 CAPNS2Q96L46 248 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 WDR41Q9HAD4 459 aa16.57■□□□□ 0.24
TRIM39-205ENST00000396551 H3BMM5 538 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 CFLARO15519 480 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 PRLP01236 227 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF37AP17032 561 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 OGNP20774 298 aaKnown RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 MSX2P35548 267 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 SLC11A2P49281 568 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 STC1P52823 247 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 NFKB2Q00653 900 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 LAMB3Q13751 1172 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 OR4D1Q15615 310 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 TYSND1Q2T9J0 566 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 MDGA1Q8NFP4 955 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 GATA6Q92908 595 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 EXT2Q93063 718 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 CDK5RAP1Q96SZ6 601 aaKnown RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 AARSD1Q9BTE6 412 aaKnown RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 CINPQ9BW66 212 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 NACA2Q9H009 215 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 NLE1Q9NVX2 485 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 TRAF6Q9Y4K3 522 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 ANAPC1Q9H1A4 1944 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 SUPT7LO94864 414 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 LINGO3P0C6S8 592 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 OXCT1P55809 520 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 LRRC36Q1X8D7 754 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 SFT2D3Q587I9 215 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 RYBPQ8N488 228 aaPredicted RBP16.56■□□□□ 0.24
TRIM39-205ENST00000396551 EFCAB1Q9HAE3 211 aa16.56■□□□□ 0.24
TRIM39-205ENST00000396551 HOXA2O43364 376 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 STC2O76061 302 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 PENKP01210 267 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-205ENST00000396551 PEX2P28328 305 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 SCNN1BP51168 640 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 MS4A2Q01362 244 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 CYTH1Q15438 398 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 SETMARQ53H47 684 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-205ENST00000396551 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 PDSS2Q86YH6 399 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 SERPINI1Q99574 410 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 MED16Q9Y2X0 877 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 TANC1Q9C0D5 1861 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 LRRC14BA6NHZ5 514 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 INSIG1O15503 277 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 CORO1AP31146 461 aaKnown RBP16.55■□□□□ 0.24
TRIM39-205ENST00000396551 RFTN1Q14699 578 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-205ENST00000396551 BBS5Q8N3I7 341 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 RNF148Q8N7C7 305 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 MTHFD2P13995 350 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 CDH13P55290 713 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 HERVK_113P63132 956 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 CAPRIN2Q6IMN6 1127 aaKnown RBP16.55■□□□□ 0.24
TRIM39-205ENST00000396551 SNX31Q8N9S9 440 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 TRMOQ9BU70 441 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 ERVK-6Q9BXR3 956 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 RNF38Q9H0F5 515 aa16.55■□□□□ 0.24
TRIM39-205ENST00000396551 MICAL3Q7RTP6 2002 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 UBXN8O00124 270 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PPP6CO00743 305 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 TSPAN3O60637 253 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms