RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NAA15Q9BXJ9 866 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 BRINP2Q9C0B6 783 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CTDSP1Q9GZU7 261 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 RAD21L1Q9H4I0 556 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 C17orf75Q9HAS0 396 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PLEKHA2Q9HB19 425 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 PCDH9Q9HC56 1237 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 METTL14Q9HCE5 456 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ENTPD7Q9NQZ7 604 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DDX21Q9NR30 783 aaKnown RBP eCLIP0.52□□□□□ -2.331e-323■■■□□ 15.6
SNORD28-201ENST00000384706 TLR8Q9NR97 1041 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 BABAM1Q9NWV8 329 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 MCM9Q9NXL9 1143 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 DLGAP2Q9P1A6 1054 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 IFT80Q9P2H3 777 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 KLHL42Q9P2K6 505 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TCEAL9Q9UHQ7 104 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 TINAGQ9UJW2 476 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ACSL5Q9ULC5 683 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 C19orf53Q9UNZ5 99 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CNPY2Q9Y2B0 182 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EXOGQ9Y2C4 368 aaKnown RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 AMDHD2Q9Y303 409 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 OR2W1Q9Y3N9 320 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 JRKLQ9Y4A0 524 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 NFE2L3Q9Y4A8 694 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 CLDN16Q9Y5I7 305 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 EID1Q9Y6B2 187 aa0.52□□□□□ -2.33
SNORD28-201ENST00000384706 COL4A4P53420 1690 aaPredicted RBP0.52□□□□□ -2.33
SNORD28-201ENST00000384706 ANKRD62A6NC57 917 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SH2D7A6NKC9 451 aaPredicted RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 A6NL46 340 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 HSPB2A8KAH6 182 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 KLLNB2CW77 178 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 PLOD2O00469 737 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF646O15015 1829 aaPredicted RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 FFAR2O15552 330 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SEPT4O43236 478 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ZNHIT1O43257 154 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TSPAN6O43657 245 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SYNGR3O43761 229 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TCEA3O75764 348 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 KRT38O76015 456 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ACTL6BO94805 426 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 MOCS3O95396 460 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 METTL18O95568 372 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 IGKV3-15P01624 115 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 IGHV4-39P01824 125 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 NR3C1P04150 777 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 EDN1P05305 212 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 MMP2P08253 660 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ITGA2BP08514 1039 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 PCNAP12004 261 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 CEACAM1P13688 526 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ZNF8P17098 575 aaPredicted RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 CAPN2P17655 700 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ATF3P18847 181 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 CD58P19256 250 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ABCB4P21439 1286 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RRM1P23921 792 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 BDKRB2P30411 391 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 HOXC8P31273 242 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TLX1P31314 330 aaPredicted RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RYKP34925 604 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 AARSP49588 968 aaKnown RBP eCLIP0.51□□□□□ -2.335e-21■□□□□ 9.8
SNORD28-201ENST00000384706 CDK7P50613 346 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 BMXP51813 675 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RBM5P52756 815 aaKnown RBP eCLIP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 NR1H2P55055 460 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 HNRNPH2P55795 449 aaKnown RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SNRPD1P62314 119 aaKnown RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 AP2B1P63010 937 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RPL24P83731 157 aaKnown RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 GOLGA8FQ08AF8 430 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 GAGE5Q13069 117 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 GAGE6Q13070 117 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RIGQ13278 110 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TUBB2AQ13885 445 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SPARCL1Q14515 664 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 HSPB2Q16082 182 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SLC18A3Q16572 532 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 EIF2S3LQ2VIR3 472 aaKnown RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 KIAA1644Q3SXP7 199 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 ZC2HC1CQ53FD0 456 aaPredicted RBP0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM35AQ53FP2 167 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TECRLQ5HYJ1 363 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 FFAR4Q5NUL3 377 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SLC25A30Q5SVS4 291 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 DGAT2L7PQ6IED9 249 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TTI2Q6NXR4 508 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 GJB7Q6PEY0 223 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 BHLHB9Q6PI77 547 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 DOK6Q6PKX4 331 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 KLHL17Q6TDP4 642 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 FAM198BQ6UWH4 519 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SH2D5Q6ZV89 423 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 MOB3CQ70IA8 216 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 TAOK1Q7L7X3 1001 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 RAB11FIP2Q7L804 512 aa0.51□□□□□ -2.33
SNORD28-201ENST00000384706 SYT13Q7L8C5 426 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms