RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ATPIF1Q9UII2 106 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ADGRL2O95490 1459 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 A0A0G2JPF8 293 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 OR2AT4A6NND4 320 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 HNRNPCL3B7ZW38 293 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 C1QTNF3-AMACRE9PGA6 284 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MAFKO60675 156 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CCNB2O95067 398 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SCGB1D2O95969 90 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SLC35G4P0C7Q5 338 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZSCAN5DPP0CG00 497 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 HNRNPCL4P0DMR1 293 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ATF6P18850 670 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CHAF1BQ13112 559 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 NAB1Q13506 487 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 GIT2Q14161 759 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 TLR1Q15399 786 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 GRIK4Q16099 956 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 LCN1P1Q5VSP4 162 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 DENND1CQ8IV53 801 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ATP13A3Q9H7F0 1226 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 C3orf14Q9HBI5 128 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MRPL17Q9NRX2 175 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 PNPLA3Q9NST1 481 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ETNK2Q9NVF9 386 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 UPB1Q9UBR1 384 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 DNMT3LQ9UJW3 386 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CHST10O43529 356 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ALOX5P09917 674 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 PIRTP0C851 137 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CD44P16070 742 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 NPR2P20594 1047 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MTHFRP42898 656 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ADAM8P78325 824 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 DPYSL3Q14195 570 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 FAM153CQ494X1 144 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SBK1Q52WX2 424 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ANXA8L1Q5VT79 327 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZCCHC12Q6PEW1 402 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF554Q86TJ5 538 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 PSTKQ8IV42 348 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 SYNPOQ8N3V7 929 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF548Q8NEK5 533 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 OR52K2Q8NGK3 314 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MCCC2Q9HCC0 563 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 EIF3KQ9UBQ5 218 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ASF1AQ9Y294 204 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MAGEC1O60732 1142 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 NT5EP21589 574 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 GDI2P50395 445 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ILF2Q12905 390 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 SF1Q15637 639 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 METTL21CQ5VZV1 264 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ALG1LQ6GMV1 187 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 UNC5AQ6ZN44 842 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 QSOX2Q6ZRP7 698 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 LINGO2Q7L985 606 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 GPR180Q86V85 440 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MCCC1Q96RQ3 725 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 AARSD1Q9BTE6 412 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF471Q9BX82 626 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ELOVL4Q9GZR5 314 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ATP6AP2A0A1C7CYW4 349 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 AKAP8O43823 692 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 ATP6AP2O75787 350 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 AZGP1P25311 298 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 TTPAP49638 278 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF155Q12901 538 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 AFTPHQ6ULP2 937 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 FRMD7Q6ZUT3 714 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 NRSN1Q8IZ57 195 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 BRSK1Q8TDC3 778 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 AP2M1Q96CW1 435 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 DMRTB1Q96MA1 342 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MGME1Q9BQP7 344 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CORO1BQ9BR76 489 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 TUT1Q9H6E5 874 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SEMA3GQ9NS98 782 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 OSER1Q9NX31 292 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SEC14L3Q9UDX4 400 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF180Q9UJW8 692 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MED31Q9Y3C7 131 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 RARAP10276 462 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 LHCGRP22888 699 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 MIPP30301 263 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 PPP3CAQ08209 521 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 CDKL4Q5MAI5 379 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 PRAMEF17Q5VTA0 474 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 C11orf65Q8NCR3 313 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 ZNF606Q8WXB4 792 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SMPDL3BQ92485 455 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 SEMA6BQ9H3T3 888 aa5.87□□□□□ -1.47
RFX3-204ENST00000382004 IMP3Q9NV31 184 aaKnown RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 CUEDC1Q9NWM3 386 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 STOX2Q9P2F5 926 aaPredicted RBP5.87□□□□□ -1.47
RFX3-204ENST00000382004 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms