RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 AP4E1Q9UPM8 1137 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CLUHO75153 1309 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 DPYSL4O14531 572 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 NTSP30990 170 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TLE2Q04725 743 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 HYIQ5T013 277 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CXorf57Q6NSI4 855 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 NFATC2IPQ8NCF5 419 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TMEM161BQ8NDZ6 487 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PLEKHO2Q8TD55 490 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RCN3Q96D15 328 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 INTS7Q9NVH2 962 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ABI2Q9NYB9 513 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 MGAT4BQ9UQ53 548 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ANKARQ7Z5J8 1434 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ANXA2P2A6NMY6 339 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 MAGEC1O60732 1142 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 STAU1O95793 577 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 CYP17A1P05093 508 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ANXA2P07355 339 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 ALDH9A1P49189 494 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CHRNA6Q15825 494 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 OVOS1Q6IE37 1185 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 DGLUCYQ7Z3D6 616 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 GHDCQ8N2G8 530 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RNF148Q8N7C7 305 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 TMEM8AQ9HCN3 771 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ERVK-19Q9WJR5 959 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 NR2E1Q9Y466 385 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 FAM205CA6NFA0 338 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 VAPBO95292 243 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PAPSS2O95340 614 aaPredicted RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 PIGRP01833 764 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 CRATP43155 626 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 BTDP43251 543 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 RASGEF1BQ0VAM2 473 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PDIA5Q14554 519 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 BCL2A1Q16548 175 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ARSKQ6UWY0 536 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 OR2L8Q8NGY9 312 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 ZNF416Q9BWM5 594 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 PLAGL2Q9UPG8 496 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 C14orf166Q9Y224 244 aaKnown RBP8.75□□□□□ -1.01
LIG3-202ENST00000378526 NESP48681 1621 aa8.75□□□□□ -1.01
LIG3-202ENST00000378526 FADS2P1A8MWK0 482 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 SLC34A2O95436 690 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CYP21A2P08686 494 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MAPK3P27361 379 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 FXR1P51114 621 aaKnown RBP eCLIP8.74□□□□□ -1.01
LIG3-202ENST00000378526 MVKQ03426 396 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 DSG2Q14126 1118 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 RAD9BQ6WBX8 426 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FBXO25Q8TCJ0 367 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SCGB1C1Q8TD33 95 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FAM89AQ96GI7 184 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 RNF32Q9H0A6 362 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CAPN10Q9HC96 672 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 POLRMTO00411 1230 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 OPLAHO14841 1288 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ACSL4O60488 711 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 HMBSP08397 361 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TNNI3P19429 210 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CD72P21854 359 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 IL4RP24394 825 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CDC25AP30304 524 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 NOS2P35228 1153 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 HALP42357 657 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 AFF3P51826 1226 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 RTP1P59025 263 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ZCCHC9Q8N567 271 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 TSEN15Q8WW01 171 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■■■□□ 16.6
LIG3-202ENST00000378526 EBNA1BP2Q99848 306 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 ADAM28Q9UKQ2 775 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 GSC2O15499 205 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SORBS3O60504 671 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ITGAVP06756 1048 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 UCHL1P09936 223 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TSHRP16473 764 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 RPS3P23396 243 aaKnown RBP eCLIP8.74□□□□□ -1.01
LIG3-202ENST00000378526 MTMR1Q13613 665 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ZNF268Q14587 947 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 DLGAP5Q15398 846 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ZNHIT3Q15649 155 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 RNF44Q7L0R7 432 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CATSPER4Q7RTX7 472 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FOXRED2Q8IWF2 684 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 HYLS1Q96M11 299 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SECISBP2Q96T21 854 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 TMED9Q9BVK6 235 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SPON1Q9HCB6 807 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 PCDHGB2Q9Y5G2 931 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SLC9A3R1O14745 358 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms