RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 C17orf64Q86WR6 236 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 AP2M1Q96CW1 435 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 MPP4Q96JB8 637 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 DPYSL5Q9BPU6 564 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 FAM192AQ9GZU8 254 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ACSS2Q9NR19 701 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ING3Q9NXR8 418 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 RIPK2O43353 540 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 LAG3P18627 525 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 GLRA2P23416 452 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ITGA1P56199 1179 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 USP46P62068 366 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ELOAQ14241 798 aaKnown RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 OR4L1Q8NH43 312 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 FATE1Q969F0 183 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 EXOSC8Q96B26 276 aaKnown RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 CCDC177Q9NQR7 707 aaPredicted RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 GZMAP12544 262 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 SELPP16109 830 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 AHCYP23526 432 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 MCL1Q07820 350 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 TAF10Q12962 218 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 SPANXN2Q5MJ10 180 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 RHBDF2Q6PJF5 856 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 AMIGO1Q86WK6 493 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ELOA2Q8IYF1 753 aaPredicted RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 ZNF607Q96SK3 696 aa14.12□□□□□ -0.15
TRIM13-202ENST00000378182 DDX18Q9NVP1 670 aaKnown RBP14.12□□□□□ -0.15
TRIM13-202ENST00000378182 SH3D21A4FU49 640 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ASNA1O43681 348 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PAGE1O75459 146 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 GRIA3P42263 894 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 TOP3AQ13472 1001 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ZDHHC20Q5W0Z9 365 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 BEND5Q7L4P6 421 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 APOPT1Q96IL0 206 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 GAL3ST1Q99999 423 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 POLE3Q9NRF9 147 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 GRIA4P48058 902 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 STARP49675 285 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CDC42P60953 191 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 KPNB1Q14974 876 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CHST4Q8NCG5 386 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 NUAK2Q9H093 628 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 SEMA4AQ9H3S1 761 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 GIT1Q9Y2X7 761 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CPSF4LA6NMK7 179 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ATG13O75143 517 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ULK1O75385 1050 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 RPL17P18621 184 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 MRPS22P82650 360 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 LGALS3BPQ08380 585 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ITIH4Q14624 930 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 RTL4Q6ZR62 310 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CAMK1DQ8IU85 385 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 DNAJC28Q9NX36 388 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 MAP4K5Q9Y4K4 846 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 ZFP37Q9Y6Q3 630 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 OR1F1O43749 312 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PDE9AO76083 593 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PECAM1P16284 738 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CHAF1BQ13112 559 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 SETD9Q8NE22 299 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 OR52E6Q96RD3 313 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 RIOX1Q9H6W3 641 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 C3orf14Q9HBI5 128 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 E9PCH4 1651 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 RFXANKO14593 260 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 INMTO95050 263 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 FAM58BPP0C7Q3 252 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CYP4F8P98187 520 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 NEK5Q6P3R8 708 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 GPRIN3Q6ZVF9 776 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CLVS1Q8IUQ0 354 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PAIP1Q9H074 479 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 MORC2Q9Y6X9 1032 aaPredicted RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 KAT6AQ92794 2004 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PEX10O60683 326 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PURAQ00577 322 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 LSM12Q3MHD2 195 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 DUPD1Q68J44 220 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 TRIM40Q6P9F5 258 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 WDR59Q6PJI9 974 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PIGZQ86VD9 579 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 NKAPQ8N5F7 415 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
TRIM13-202ENST00000378182 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 CAPSLQ8WWF8 208 aa14.11□□□□□ -0.15
TRIM13-202ENST00000378182 PYDC1Q8WXC3 89 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms