RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MAP9Q49MG5 647 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 TDRD12Q587J7 1177 aaKnown RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 ARMC12Q5T9G4 340 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 SPECC1LQ69YQ0 1117 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 TIGD7Q6NT04 549 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 SPRED1Q7Z699 444 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 RAVER1Q8IY67 606 aaKnown RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 ARFGAP1Q8N6T3 406 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 PLA2G15Q8NCC3 412 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 SYN2Q92777 582 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 COQ10AQ96MF6 247 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 DPYSL5Q9BPU6 564 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 ISCUQ9H1K1 167 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 CARS2Q9HA77 564 aaKnown RBP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC6-204ENST00000376643 LRIT1Q9P2V4 623 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 LOXL2Q9Y4K0 774 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 PCDHB11Q9Y5F2 797 aa14.77□□□□□ -0.05
HDAC6-204ENST00000376643 RP1P56715 2156 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 A0A1W2PNU3 283 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-204ENST00000376643 TMEM202A6NGA9 273 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 RHPN2P1A8MT19 583 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 DDX3XO00571 662 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC6-204ENST00000376643 C1QL1O75973 258 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 HEXIM1O94992 359 aaKnown RBP14.76□□□□□ -0.05
HDAC6-204ENST00000376643 PRB1P04280 392 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 PRKCGP05129 697 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 LIPCP11150 499 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 CCNB1P14635 433 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 CR2P20023 1033 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 SLC5A2P31639 672 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 MMP13P45452 471 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 SLC10A7Q0GE19 358 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 HLTFQ14527 1009 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC6-204ENST00000376643 KRT81Q14533 505 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 POLNQ7Z5Q5 900 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 PIM3Q86V86 326 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 NIPA2Q8N8Q9 360 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 ZSCAN1Q8NBB4 408 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 HSPH1Q92598 858 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 DTD2Q96FN9 168 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 SCRN2Q96FV2 425 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 CSPG4P5Q96PW8 444 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 TEX101Q9BY14 249 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 TMEM168Q9H0V1 697 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 CDH19Q9H159 772 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 AMACRQ9UHK6 382 aa14.76□□□□□ -0.05
HDAC6-204ENST00000376643 SMG1Q96Q15 3661 aaKnown RBP14.76□□□□□ -0.05
HDAC6-204ENST00000376643 A0A1W2PQJ5 194 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 A0A1W2PQM1 296 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 HGSO14964 777 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 NOBOXO60393 691 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 CPNE6O95741 557 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 ZNF30P17039 623 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 GPR3P46089 330 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 ZFP36L1Q07352 338 aaKnown RBP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 DPTQ07507 201 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 TCEA2Q15560 299 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 CNGA3Q16281 694 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 RAET1GQ6H3X3 334 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 ARHGAP36Q6ZRI8 547 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 CYP4V2Q6ZWL3 525 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 B3GNT8Q7Z7M8 397 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 HEATR4Q86WZ0 1026 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 Q8N9G6 341 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 GPBAR1Q8TDU6 330 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 ZDHHC1Q8WTX9 485 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 TTC9Q92623 222 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 MED8Q96G25 268 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
HDAC6-204ENST00000376643 PISDQ9UG56 409 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 RABGEF1Q9UJ41 708 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 PCDHGC4Q9Y5F7 938 aa14.75□□□□□ -0.05
HDAC6-204ENST00000376643 GOLGA6CA6NDK9 693 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 GOLGA6BA6NDN3 693 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 MYO1FO00160 1098 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 MAFKO60675 156 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 PGLSO95336 258 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 IVLP07476 585 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 GOLGA6DP0CG33 693 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 SFTPCP11686 197 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 PLA2G2AP14555 144 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 AMPD1P23109 780 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 EPHB1P54762 984 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 CDK3Q00526 305 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 TRA2AQ13595 282 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC6-204ENST00000376643 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 CCDC122Q5T0U0 273 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 USP53Q70EK8 1073 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 MAP7D3Q8IWC1 876 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 MCCC1Q96RQ3 725 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-204ENST00000376643 FRMD8Q9BZ67 464 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-204ENST00000376643 TRIM7Q9C029 511 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 NOD2Q9HC29 1040 aa14.74□□□□□ -0.05
HDAC6-204ENST00000376643 MRPL40Q9NQ50 206 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms