RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 MTRRQ9UBK8 725 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 DGKBQ9Y6T7 804 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 CITO14578 2027 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 ICMTO60725 284 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 H2AFYO75367 372 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 KRT8P05787 483 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 APRTP07741 180 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 HK2P52789 917 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 MPP1Q00013 466 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 ECT2LQ008S8 904 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 IFITM3Q01628 133 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 SOWAHAQ2M3V2 549 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 GOLGA7BQ2TAP0 167 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 AASDHQ4L235 1098 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 LHX8Q68G74 356 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 GET4Q7L5D6 327 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 GRAMD2AQ8IUY3 354 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 SCUBE3Q8IX30 993 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 KCTD6Q8NC69 237 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 ADAM32Q8TC27 787 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 FBXL20Q96IG2 436 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PPP1R36Q96LQ0 422 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 ARMC1Q9NVT9 282 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 IFT80Q9P2H3 777 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 WARS2Q9UGM6 360 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 UBQLN1Q9UMX0 589 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 PCDHA11Q9Y5I1 949 aa12.18□□□□□ -0.46
C9orf3-203ENST00000375315 MRPL42Q9Y6G3 142 aaKnown RBP12.18□□□□□ -0.46
C9orf3-203ENST00000375315 DLGAP1O14490 977 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 MAN1A2O60476 641 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 KPNA6O60684 536 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CILPO75339 1184 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 NTRK1P04629 796 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 LCP1P13796 627 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 PRKCAP17252 672 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 PSMA2P25787 234 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CAPGP40121 348 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CDC20Q12834 499 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 ARHGEF6Q15052 776 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 RAB6CQ53S08 254 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 AGMOQ6ZNB7 445 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 OFCC1Q8IZS5 231 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 PCDH20Q8N6Y1 951 aaKnown RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 JOSD2Q8TAC2 188 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 RASSF5Q8WWW0 418 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 VMP1Q96GC9 406 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.462e-7■■■■■ 35.1
C9orf3-203ENST00000375315 RAB6CQ9H0N0 254 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 SP140LQ9H930 580 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CDYLQ9Y232 598 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TESMINQ9Y4I5 508 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 NME7Q9Y5B8 376 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 ARL5CA6NH57 179 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 E7ENX8 843 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 HOXC11O43248 304 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 HUS1O60921 280 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CLIC3O95833 236 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 IGHA2P01877 340 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CDH1P12830 882 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 NCAM1P13591 858 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TYK2P29597 1187 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TAZQ16635 292 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TRIM71Q2Q1W2 868 aaKnown RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 LRRC8EQ6NSJ5 796 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CHST15Q7LFX5 561 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 PCDHGA7Q9Y5G6 932 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TCAF2A6NFQ2 919 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 RNF103O00237 685 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 GPR182O15218 404 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TIMM44O43615 452 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 THP07101 528 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CKBP12277 381 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 ARL1P40616 181 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 YAP1P46937 504 aaKnown RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 GATMP50440 423 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 MAPK11Q15759 364 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 FAM102AQ5T9C2 384 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CCSAPQ6IQ19 270 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 CRTC3Q6UUV7 619 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-203ENST00000375315 DHFR2Q86XF0 187 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 HCAR2Q8TDS4 363 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 MED10Q9BTT4 135 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 ZNF385DQ9H6B1 395 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 ENPP5Q9UJA9 477 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 MOSPD1Q9UJG1 213 aa12.17□□□□□ -0.46
C9orf3-203ENST00000375315 NT5C1B-RDH14C9J2C7 533 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 PRKCGP05129 697 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 GSNP06396 782 aa12.16□□□□□ -0.46
C9orf3-203ENST00000375315 HSPA1AP0DMV8 641 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms