RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TPTEP56180 551 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ACTR1AP61163 376 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 VAC14Q08AM6 782 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SGCBQ16585 318 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 DACT2Q5SW24 774 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CEP97Q8IW35 865 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 FAM172AQ8WUF8 416 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 RAD54LQ92698 747 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 RORBQ92753 470 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ATXN7L3BQ96GX2 97 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 C9orf72Q96LT7 481 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 EPB41L1Q9H4G0 881 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 IL1RL2Q9HB29 575 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MIEF1Q9NQG6 463 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TOR4AQ9NXH8 423 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MTRRQ9UBK8 725 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 HEY2Q9UBP5 337 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 DRG1Q9Y295 367 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 REXO2Q9Y3B8 237 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 A0A087WXM4 84 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CHURC1-FNTBB4DL54 471 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SNAP23O00161 211 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 EIF3FO00303 357 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 RPA3P35244 121 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 RFX5P48382 616 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 UNQ6126/PRO20091Q6UXV3 157 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 FAM129CQ86XR2 697 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CCDC33Q8N5R6 958 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 OR2W6PQ8NHA6 318 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TBC1D15Q8TC07 691 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 GPATCH1Q9BRR8 931 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ABCC13Q9NSE7 274 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 GNG8Q9UK08 70 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MAPRE3Q9UPY8 281 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MYRFQ9Y2G1 1151 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 A0A1W2PQC6 194 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 MGAT4DA6NG13 374 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CCR4P51679 360 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CAPZA1P52907 286 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 PLEKHG6Q3KR16 790 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CYP4Z1Q86W10 505 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 ADGRG2Q8IZP9 1017 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 DPP10Q8N608 796 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 OR10Q1Q8NGQ4 319 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 OR4C6Q8NH72 309 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 NPLOC4Q8TAT6 608 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 FNIP1Q8TF40 1166 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 RRNAD1Q96FB5 475 aaKnown RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CCDC115Q96NT0 180 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 GSDMCQ9BYG8 508 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 MOV10Q9HCE1 1003 aaKnown RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 UFSP2Q9NUQ7 469 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 ST3GAL5Q9UNP4 418 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 COL1A2P08123 1366 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 TLX3O43711 291 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 FTLP02792 175 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 PTPN4P29074 926 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 OR1E1P30953 314 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 MAPKAPK2P49137 400 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 MAPK10P53779 464 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CAP1Q01518 475 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 ALDH6A1Q02252 535 aaKnown RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 SLC34A1Q06495 639 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 HSDL2Q6YN16 418 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 TIPARPQ7Z3E1 657 aaKnown RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 METTL4Q8N3J2 472 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 PHOSPHO2Q8TCD6 241 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 CHTF18Q8WVB6 975 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 KLHL6Q8WZ60 621 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 UHRF1Q96T88 793 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-206ENST00000367253 TASP1Q9H6P5 420 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 INTS13Q9NVM9 706 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 RAPGEFL1Q9UHV5 662 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 ING4Q9UNL4 249 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 Q9Y3F1 56 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
SYNE1-206ENST00000367253 SMIM35A0A1B0GVV1 85 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 FAM92AA1XBS5 289 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 SYN3O14994 580 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 KHDRBS3O75525 346 aaKnown RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 UBXN7O94888 489 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 ACOT2P49753 483 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 TRAF2Q12933 501 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PIGHQ14442 188 aaPredicted RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 MEA1Q16626 185 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PPP1R15BQ5SWA1 713 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 TATDN1Q6P1N9 297 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 ATG9AQ7Z3C6 839 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 KDM1BQ8NB78 822 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 CLCC1Q96S66 551 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 TARS2Q9BW92 718 aaKnown RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 EPB41L4AQ9HCS5 686 aaPredicted RBP8.65□□□□□ -1.03
SYNE1-206ENST00000367253 DUSP12Q9UNI6 340 aa8.65□□□□□ -1.03
SYNE1-206ENST00000367253 HTR3EA5X5Y0 456 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms