RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 FAM228BP0C875 321 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 LIPCP11150 499 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PNLIPP16233 465 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 SLC5A2P31639 672 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 RFC1P35251 1148 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 UGT1A5P35504 534 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 MMP12P39900 470 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 ZNF143P52747 638 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 NDST2P52849 883 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 KIAA1024LP59773 190 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 INPP5AQ14642 412 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 RAB6CQ53S08 254 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 KIAA1614Q5VZ46 1190 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 USP53Q70EK8 1073 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 CCNJLQ8IV13 435 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 TSACCQ96A04 125 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 RBM15Q96T37 977 aaKnown RBP eCLIP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 CINPQ9BW66 212 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 RAB6CQ9H0N0 254 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 LRRN3Q9H3W5 708 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 CLMPQ9H6B4 373 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PCDH12Q9NPG4 1184 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 LHX3Q9UBR4 397 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PNMA8BQ9ULN7 279 aaPredicted RBP12.47□□□□□ -0.41
MRPL55-209ENST00000366735 FZD10Q9ULW2 581 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 COQ6Q9Y2Z9 468 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 OR1A2Q9Y585 309 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PCDHB11Q9Y5F2 797 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 DGKBQ9Y6T7 804 aa12.47□□□□□ -0.41
MRPL55-209ENST00000366735 PDE2AO00408 941 aaPredicted RBP12.46□□□□□ -0.41
MRPL55-209ENST00000366735 KIF5CO60282 957 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 SFTPCP11686 197 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 GLB1P16278 677 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 CD82P27701 267 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 MAGEA1P43355 309 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 LIG3P49916 1009 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 PEX6Q13608 980 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 ARHGEF7Q14155 803 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 KIAA1328Q86T90 577 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 SGF29Q96ES7 293 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 PDXPQ96GD0 296 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 CMKLR1Q99788 373 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 CNPY3Q9BT09 278 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 NOL6Q9H6R4 1146 aaKnown RBP12.46□□□□□ -0.41
MRPL55-209ENST00000366735 SP110Q9HB58 689 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 KCTD5Q9NXV2 234 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 PISDQ9UG56 409 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 APPL1Q9UKG1 709 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 INTUQ9ULD6 942 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 LOXL2Q9Y4K0 774 aa12.46□□□□□ -0.41
MRPL55-209ENST00000366735 ASH1LQ9NR48 2969 aaKnown RBP12.45□□□□□ -0.42
MRPL55-209ENST00000366735 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 DDX3XO00571 662 aaKnown RBP eCLIP12.45□□□□□ -0.422e-9■■□□□ 13.5
MRPL55-209ENST00000366735 TNFRSF10CO14798 259 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
MRPL55-209ENST00000366735 INSIG1O15503 277 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 DAPK3O43293 454 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 KRT86O43790 486 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 PALMO75781 387 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 ITGB2P05107 769 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 CELA2BP08218 269 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-209ENST00000366735 CHRNB2P17787 502 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 CSNK1DP48730 415 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 CCL7P80098 99 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 PTP4A2Q12974 167 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 RFTN1Q14699 578 aaPredicted RBP12.45□□□□□ -0.42
MRPL55-209ENST00000366735 TCEA2Q15560 299 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 C14orf28Q4W4Y0 310 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 DNTTIP2Q5QJE6 756 aaKnown RBP12.45□□□□□ -0.42
MRPL55-209ENST00000366735 MANEAQ5SRI9 462 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 TMEM164Q5U3C3 297 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 MON1BQ7L1V2 547 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 PRICKLE2Q7Z3G6 844 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 KIF18AQ8NI77 898 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 COL26A1Q96A83 441 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 AGPAT1Q99943 283 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 FOXP3Q9BZS1 431 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 SEMA4CQ9C0C4 833 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 LACRTQ9GZZ8 138 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 WDR26Q9H7D7 661 aa12.45□□□□□ -0.42
MRPL55-209ENST00000366735 LZTFL1Q9NQ48 299 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms