RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 ARHGAP22Q7Z5H3 698 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZNF606Q8WXB4 792 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 NT5C1BQ96P26 610 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 HAPLN3Q96S86 360 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 SUDS3Q9H7L9 328 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 METTL14Q9HCE5 456 aaKnown RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 RCOR3Q9P2K3 495 aaPredicted RBP8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 CROTQ9UKG9 612 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 NEU3Q9UQ49 428 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
HMGB1P39-201ENST00000366304 CHD5Q8TDI0 1954 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ARHGAP10A1A4S6 786 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM170AA1A519 330 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 PRSS38A1L453 326 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 CDC14CA4D256 554 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 CETN3O15182 167 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 HSF2BPO75031 334 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 DAB1O75553 588 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 EML2O95834 649 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 GLI1P08151 1106 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 CCNB1P14635 433 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 MMP12P39900 470 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 GPR3P46089 330 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 RAB15P59190 212 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 RALGDSQ12967 914 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 CHAF1BQ13112 559 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 MTM1Q13496 603 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 CROCCQ5TZA2 2017 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 TMEM71Q6P5X7 295 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZNF783Q6ZMS7 281 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 KDELC2Q7Z4H8 507 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZC3H18Q86VM9 953 aaKnown RBP8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 PASD1Q8IV76 773 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 NT5C3BQ969T7 300 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ARHGEF26Q96DR7 871 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 HMCESQ96FZ2 354 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 C1orf74Q96LT6 269 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZNF396Q96N95 335 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 RANBP9Q96S59 729 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 RUFY1Q96T51 708 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 TBCBQ99426 244 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 SCAND2PQ9GZW5 306 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 WDCPQ9H6R7 721 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 MLXIPLQ9NP71 852 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 FBXO8Q9NRD0 319 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ASNSD1Q9NWL6 643 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 DKK3Q9UBP4 350 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 HPSEQ9Y251 543 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ARHGEF17Q96PE2 2063 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 ANKRD36A6QL64 1941 aa8.5□□□□□ -1.05
HMGB1P39-201ENST00000366304 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TSPAN11A1L157 253 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRIM49BA6NDI0 452 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 BECN2A8MW95 431 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM72CH0Y354 149 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 RECQL5O94762 991 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TMCC1O94876 653 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 CBX6O95503 412 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 CEACAM5P06731 702 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 KRT5P13647 590 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRIM23P36406 574 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 DLSTP36957 453 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 SNRPD1P62314 119 aaKnown RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 MC1RQ01726 317 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 APBA1Q02410 837 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 MEA1Q16626 185 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 EFHC1Q5JVL4 640 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 BRMS1LQ5PSV4 323 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM72AQ5TYM5 149 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM72DQ6L9T8 149 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 SLC30A9Q6PML9 568 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 LRRC31Q6UY01 552 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 BNIPLQ7Z465 357 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 NLRP14Q86W24 1093 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 FAM72BQ86X60 149 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 GALNT6Q8NCL4 622 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 CCDC112Q8NEF3 446 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 EXOC2Q96KP1 924 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 NSMCE3Q96MG7 304 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TEFMQ96QE5 360 aaKnown RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 EFHD1Q9BUP0 239 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 OSBPL1AQ9BXW6 950 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 ZYG11BQ9C0D3 744 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TTYH3Q9C0H2 523 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 NOL6Q9H6R4 1146 aaKnown RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 AKIRIN1Q9H9L7 192 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 SIDT1Q9NXL6 827 aaKnown RBP8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 LHX3Q9UBR4 397 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 POLHQ9Y253 713 aa8.49□□□□□ -1.05
HMGB1P39-201ENST00000366304 TRBV23OR9-2A0A075B6M9 112 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms