RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 USP41Q3LFD5 358 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 NXNQ6DKJ4 435 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CILP2Q8IUL8 1156 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CCDC117Q8IWD4 279 aaPredicted RBP16.04■□□□□ 0.16
PTPN5-201ENST00000358540 LSMEM2Q8N112 164 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 GDPD5Q8WTR4 605 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 SIKE1Q9BRV8 207 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 RNF38Q9H0F5 515 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 POMKQ9H5K3 350 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 IGSF5Q9NSI5 407 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CIDEBQ9UHD4 219 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 PDE4DIPQ5VU43 2346 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 FKBP6O75344 327 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 ALOX15P16050 662 aaPredicted RBP16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CHN2P52757 468 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 EPHB1P54762 984 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CDKN2DP55273 166 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 TAF12Q16514 161 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 HECTD2Q5U5R9 776 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 DUS1LQ6P1R4 473 aaKnown RBP16.04■□□□□ 0.16
PTPN5-201ENST00000358540 RNF111Q6ZNA4 994 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 PHF21BQ96EK2 531 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 PHF12Q96QT6 1004 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CLSTN3Q9BQT9 956 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 DRC3Q9H069 523 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 TCF7L2Q9NQB0 619 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 MTRRQ9UBK8 725 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 ADAMTS6Q9UKP5 1117 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 PACSIN3Q9UKS6 424 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
PTPN5-201ENST00000358540 CBX4O00257 560 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 HOXA2O43364 376 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 PDE5AO76074 875 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 APOA4P06727 396 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 ATP6V1B1P15313 513 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TSPAN8P19075 237 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TRIP10Q15642 601 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 LINGO4Q6UY18 593 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 RYBPQ8N488 228 aaPredicted RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 LZICQ8WZA0 190 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 CCDC124Q96CT7 223 aaKnown RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TMEM175Q9BSA9 504 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 MRPL46Q9H2W6 279 aaKnown RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 PDFQ9HBH1 243 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 NDUFA13Q9P0J0 144 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 MID2Q9UJV3 735 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 GOT2P00505 430 aaKnown RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 MAPKAPK2P49137 400 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 COPAP53621 1224 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 CYLC2Q14093 348 aaPredicted RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 SEMA3AQ14563 771 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 GRAMD1BQ3KR37 738 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 SLC8B1Q6J4K2 584 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 KLHDC10Q6PID8 442 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 GTSE1Q9NYZ3 720 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 RAP2CQ9Y3L5 183 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 LOC285095A0A1B0GVY8 99 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 MROH6A6NGR9 719 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 CLPTM1O96005 669 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TFEBP19484 476 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 SLC11A2P49281 568 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 RPL14P50914 215 aaKnown RBP16.03■□□□□ 0.16
PTPN5-201ENST00000358540 POU4F1Q01851 419 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TLE2Q04725 743 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 DNAL1Q4LDG9 190 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 GPR158Q5T848 1215 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 SEL1L3Q68CR1 1132 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 TMEM207Q6UWW9 146 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 CFHR5Q9BXR6 569 aa16.03■□□□□ 0.16
PTPN5-201ENST00000358540 CDK4P11802 303 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 CPOXP36551 454 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 LEPRP48357 1165 aaKnown RBP16.02■□□□□ 0.16
PTPN5-201ENST00000358540 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
PTPN5-201ENST00000358540 CBX3Q13185 183 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 GRM2Q14416 872 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 FRMD7Q6ZUT3 714 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 PDCD6IPQ8WUM4 868 aaKnown RBP16.02■□□□□ 0.16
PTPN5-201ENST00000358540 CINPQ9BW66 212 aaPredicted RBP16.02■□□□□ 0.16
PTPN5-201ENST00000358540 TTLL2Q9BWV7 592 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 STN1Q9H668 368 aaKnown RBP16.02■□□□□ 0.16
PTPN5-201ENST00000358540 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 ZNF711Q9Y462 761 aa16.02■□□□□ 0.16
PTPN5-201ENST00000358540 CCDC162PA2VCL2 907 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 MATN2O00339 956 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 GRID2O43424 1007 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 STC2O76061 302 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 OXCT1P55809 520 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 BTKQ06187 659 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.15
PTPN5-201ENST00000358540 TRIM67Q6ZTA4 783 aa16.02■□□□□ 0.15
PTPN5-201ENST00000358540 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.15
PTPN5-201ENST00000358540 RDH11Q8TC12 318 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms