RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 GPRC5AQ8NFJ5 357 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 LZICQ8WZA0 190 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BHMTQ93088 406 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CDCA5Q96FF9 252 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 OLFM1Q99784 485 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 APOL5Q9BWW9 433 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 NAA50Q9GZZ1 169 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 UXTQ9UBK9 157 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SUCOQ9UBS9 1254 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ZMYM5Q9UJ78 669 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SHROOM3Q8TF72 1996 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 KANSL1LA0AUZ9 987 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 NPHS1O60500 1241 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SNAP29O95721 258 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 THP07101 528 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 OR4Q2P0C623 313 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ALOX15P16050 662 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CCNA2P20248 432 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PCSK1P29120 753 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GGT5P36269 586 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 DIO3P55073 304 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 LIPEQ05469 1076 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ZRANB3Q5FWF4 1079 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SPESP1Q6UW49 350 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CIR1Q86X95 450 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CROCCP3Q8IVE0 287 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CRYBG2Q8N1P7 616 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM102Q8N9M5 508 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 DQX1Q8TE96 717 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 GIPC2Q8TF65 315 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 MYLPFQ96A32 169 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 CYP2S1Q96SQ9 504 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ACOX2Q99424 681 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 HNRNPABQ99729 332 aaKnown RBP6.58□□□□□ -1.36
CSDE1-203ENST00000358528 BRD8Q9H0E9 1235 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ABCG8Q9H221 673 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 PCDH12Q9NPG4 1184 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 ADAMTS5Q9UNA0 930 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 IPPQ9Y573 584 aa6.58□□□□□ -1.36
CSDE1-203ENST00000358528 SCN1AP35498 2009 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PABPN1LA6NDY0 278 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SCAMP3O14828 347 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 S100BP04271 92 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 COL6A2P12110 1019 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF26P17031 533 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ELK4P28324 431 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ADSLP30566 484 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 RPS9P46781 194 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CLCNKBP51801 687 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 IL5RAQ01344 420 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SPIDRQ14159 915 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 HERC3Q15034 1050 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 AASDHQ4L235 1098 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PKDCCQ504Y2 493 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 AARS2Q5JTZ9 985 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 MRNIPQ6NTE8 343 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 FAM126BQ8IXS8 530 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 OR10Q1Q8NGQ4 319 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ITFG1Q8TB96 612 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ANKRD49Q8WVL7 239 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 NCSTNQ92542 709 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CENPIQ92674 756 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SMARCD1Q96GM5 515 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 BDH2Q9BUT1 245 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PLK2Q9NYY3 685 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 MEIS3P2A8K0S8 358 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 FBP2O00757 339 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ARPC2O15144 300 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 TREHO43280 583 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 NOBOXO60393 691 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SMIM10L2AP0DMW4 78 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SMIM10L2BP0DMW5 78 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CLCN5P51795 746 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 MTPNP58546 118 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ANKS6Q68DC2 871 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ZBED3Q96IU2 234 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 C3orf30Q96M34 536 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ZBTB18Q99592 522 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SMOQ99835 787 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 HGH1Q9BTY7 390 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ALG2Q9H553 416 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 MROH8Q9H579 483 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SMPD3Q9NY59 655 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 HSFX1Q9UBD0 423 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PRG3Q9Y2Y8 225 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 SQORQ9Y6N5 450 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 RRN3P2A6NIE6 340 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 NME4O00746 187 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 ACOT8O14734 319 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 RSL1D1O76021 490 aaKnown RBP6.57□□□□□ -1.36
CSDE1-203ENST00000358528 CYP4B1P13584 511 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 EDNRBP24530 442 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PSMB9P28065 219 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 OXTRP30559 389 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PCYT1AP49585 367 aa6.57□□□□□ -1.36
CSDE1-203ENST00000358528 PMS2P3Q13401 168 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms