RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 FAM219BQ5XKK7 198 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 OR6B2Q6IFH4 312 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 NEK5Q6P3R8 708 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 PAPD5Q8NDF8 572 aaKnown RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 TMEM246Q9BRR3 403 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 MIR1-1HGQ9H1L0 117 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 EPS8L2Q9H6S3 715 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 LRRC4Q9HBW1 653 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 FBRSL1Q9HCM7 1045 aaKnown RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 CCDC177Q9NQR7 707 aaPredicted RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 DTLQ9NZJ0 730 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 RABL2AQ9UBK7 228 aaPredicted RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 GABBR1Q9UBS5 961 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
CD46-203ENST00000354848 ANAPC2Q9UJX6 822 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 MFHAS1Q9Y4C4 1052 aa7.87□□□□□ -1.15
CD46-203ENST00000354848 MAGEB16A2A368 324 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SYCE1LA8MT33 242 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 TCP10L2B9ZVM9 353 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 M0QYV0 167 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 FXYD1O00168 92 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CITO14578 2027 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 RIMBP2O15034 1052 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 MDM4O15151 490 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 STBD1O95210 358 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PTTG1O95997 202 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 MT-CO1P00395 513 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 KRT19P08727 400 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 TCF3P15923 654 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SLC6A2P23975 617 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 GRK3P35626 688 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SOX11P35716 441 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 GPD2P43304 727 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 NR2C2P49116 596 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CDH8P55286 799 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CCNA1P78396 465 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 C19orf57Q0VDD7 668 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 BPTFQ12830 3046 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 USP10Q14694 798 aaKnown RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 SMU1Q2TAY7 513 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CTU2Q2VPK5 515 aaKnown RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 CDONQ4KMG0 1287 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 AGAP6Q5VW22 663 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PRMT9Q6P2P2 845 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 HHIPL2Q6UWX4 724 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CCBE1Q6UXH8 406 aaPredicted RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 FAM183BPQ6ZVS7 135 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 STRADAQ7RTN6 431 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PIWIL4Q7Z3Z4 852 aaKnown RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 TMEM135Q86UB9 458 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 IFNEQ86WN2 208 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SLC22A15Q8IZD6 547 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SVOPQ8N4V2 548 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 MINDY1Q8N5J2 469 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 TXNDC5Q8NBS9 432 aaKnown RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 SIMC1Q8NDZ2 872 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 DNERQ8NFT8 737 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 BEST2Q8NFU1 509 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 OR52K1Q8NGK4 314 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 RASSF5Q8WWW0 418 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SDCCAG3Q96C92 435 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 AGAP4Q96P64 663 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 NODALQ96S42 347 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 SEPHS2Q99611 448 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 GPR22Q99680 433 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 DHRS9Q9BPW9 319 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 BDH2Q9BUT1 245 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CCDC90BQ9GZT6 254 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 POMKQ9H5K3 350 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PAK1IP1Q9NWT1 392 aaPredicted RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 ADPRHL2Q9NX46 363 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 GGA3Q9NZ52 723 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 FAM198AQ9UFP1 575 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 MAGED1Q9Y5V3 778 aaPredicted RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 BBIP1A8MTZ0 92 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 EVPLLA8MZ36 301 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PTGES3LE9PB15 166 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 K7ERI5 159 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 NR5A2O00482 541 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 NFIBO00712 420 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 KCNQ2O43526 872 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 USP12O75317 370 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 PIGRP01833 764 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 ALPLP05186 524 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 VDRP11473 427 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 BMP1P13497 986 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CHRM3P20309 590 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 CYP3A5P20815 502 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 ACTR2P61160 394 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 NCS1P62166 190 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 EMX1Q04741 257 aaPredicted RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 POU5F1BQ06416 359 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 ARHGEF6Q15052 776 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 LAIR2Q6ISS4 152 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 RPS27LQ71UM5 84 aaKnown RBP7.86□□□□□ -1.15
CD46-203ENST00000354848 SPATC1Q76KD6 591 aa7.86□□□□□ -1.15
CD46-203ENST00000354848 KCNMB4Q86W47 210 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms