RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 POLG2Q9UHN1 485 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 COL14A1Q05707 1796 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 CST1P01037 141 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 RHOCP08134 193 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF37AP17032 561 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 RECQLP46063 649 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 LIPEQ05469 1076 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 BNIP3Q12983 259 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 PRKG2Q13237 762 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ITGA7Q13683 1181 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SIM2Q14190 667 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 C8orf59Q8N0T1 100 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SFRP1Q8N474 314 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ACVR1CQ8NER5 493 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SNX27Q96L92 541 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 KCNA7Q96RP8 456 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 TLE6Q9H808 572 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 PTGDR2Q9Y5Y4 395 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 CCNA2P20248 432 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ADSLP30566 484 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 IL2P60568 153 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 AP5B1Q2VPB7 878 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 MYLK3Q32MK0 819 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 GLYATQ6IB77 296 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 EFL1Q7Z2Z2 1120 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 GPC2Q8N158 579 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ATAD1Q8NBU5 361 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 OR10Q1Q8NGQ4 319 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 ELOVL6Q9H5J4 265 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SPASTQ9UBP0 616 aa12.44□□□□□ -0.42
SNRNP48-201ENST00000342415 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■■■■■ 44.6
SNRNP48-201ENST00000342415 STBD1O95210 358 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 TBX18O95935 607 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 KRT8P05787 483 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 HALP42357 657 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ENPEPQ07075 957 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CCDC92Q53HC0 331 aaPredicted RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF621Q6ZSS3 439 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 OR4K2Q8NGD2 314 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 PSMG2Q969U7 264 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CDK15Q96Q40 435 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CCDC28BQ9BUN5 200 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 IMPAD1Q9NX62 359 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 RCOR3Q9P2K3 495 aaPredicted RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 FBXW11Q9UKB1 542 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 MAGEB3O15480 346 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ARSAP15289 507 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CDH2P19022 906 aaPredicted RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CD52P31358 61 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 NEK2P51955 445 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 RHOAP61586 193 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CYP4F2P78329 520 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 GNA12Q03113 381 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CYP4F3Q08477 520 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 RABL3Q5HYI8 236 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 STXBP5Q5T5C0 1151 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 OSTM1Q86WC4 334 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 SPPL2AQ8TCT8 520 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 TMEM74Q96NL1 305 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ABCB10Q9NRK6 738 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC8A2Q9UPR5 921 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ITGB4P16144 1822 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 A0A1W2PQH9 124 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CAPN14A8MX76 684 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC22A3O75751 556 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 KCNH1O95259 989 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CTPS1P17812 591 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 ENTPD1P49961 510 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 MTPNP58546 118 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 CDH18Q13634 790 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 TSNQ15631 228 aaKnown RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 PRMT9Q6P2P2 845 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 GALNT18Q6P9A2 607 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 SYTL1Q8IYJ3 562 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 TMIGD2Q96BF3 282 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 HNRNPABQ99729 332 aaKnown RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 RASSF1Q9NS23 344 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 EURLQ9NYK6 297 aa12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM32AQ9Y421 112 aaKnown RBP12.43□□□□□ -0.42
SNRNP48-201ENST00000342415 NPEPPSL1A6NEC2 478 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 A8MT66 165 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 NT5C1B-RDH14C9J2C7 533 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 NOBOXO60393 691 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 SNNO75324 88 aaPredicted RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 IDH2P48735 452 aaKnown RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC11A2P49281 568 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 GLUD2P49448 558 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 CDK18Q07002 472 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 RGS21Q2M5E4 152 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms