RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SPRY1O43609 319 aaPredicted RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 JRKO75564 520 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 KIAA0754O94854 1291 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 PRPF6O94906 941 aaKnown RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 TGFB1P01137 390 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 CHRNA3P32297 505 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 GARSP41250 739 aaKnown RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 PREPP48147 710 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 SRP54P61011 504 aaKnown RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 ANKRD34AQ69YU3 496 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 VPS36Q86VN1 386 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 CFAP52Q8N1V2 620 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 C12orf29Q8N999 325 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 ADAMTS17Q8TE56 1095 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 ASB12Q8WXK4 309 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 PDXPQ96GD0 296 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 TNIP3Q96KP6 325 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 REEP2Q9BRK0 252 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 PNPLA8Q9NP80 782 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 DYRK4Q9NR20 520 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 SIDT1Q9NXL6 827 aaKnown RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 SFMBT1Q9UHJ3 866 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 MAPK8IP1Q9UQF2 711 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 HBS1LQ9Y450 684 aaKnown RBP11.2□□□□□ -0.62
ATXN3-201ENST00000340660 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
ATXN3-201ENST00000340660 TLCD2A6NGC4 264 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 PROM1O43490 865 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 TMEM63AO94886 807 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 MED26O95402 600 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 TNNC2P02585 160 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 ADRB3P13945 408 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 XBP1P17861 261 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 ZNF131P52739 623 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 POSTNQ15063 836 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 FOXR2Q6PJQ5 311 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 ENPP7Q6UWV6 458 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 SYVN1Q86TM6 617 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 FAM20CQ8IXL6 584 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 TMIEQ8NEW7 156 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 CCL4L1Q8NHW4 92 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 ERCC4Q92889 916 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-201ENST00000340660 DPYSL5Q9BPU6 564 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 MMTAG2Q9BU76 263 aaKnown RBP11.19□□□□□ -0.62
ATXN3-201ENST00000340660 BHLHE41Q9C0J9 482 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-201ENST00000340660 AKIRIN1Q9H9L7 192 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-201ENST00000340660 PDE7BQ9NP56 450 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 HMGXB4Q9UGU5 601 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 PLEKHA6Q9Y2H5 1048 aa11.19□□□□□ -0.62
ATXN3-201ENST00000340660 KRTAP9-6A0A140TA67 174 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 A0A1W2PQJ5 194 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 LPOP22079 712 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-201ENST00000340660 PTPN4P29074 926 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 CA5AP35218 305 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 CA7P43166 264 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 GPR3P46089 330 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 NEK3P51956 506 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 NDST2P52849 883 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 YWHAGP61981 247 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATXN3-201ENST00000340660 OTUD4Q01804 1114 aaKnown RBP11.18□□□□□ -0.62
ATXN3-201ENST00000340660 HMBOX1Q6NT76 420 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 FAM186BQ8IYM0 893 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 CHST14Q8NCH0 376 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 OR2A12Q8NGT7 310 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 GRIN3AQ8TCU5 1115 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 ZBTB20Q9HC78 741 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-201ENST00000340660 LHX9Q9NQ69 397 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 KCND2Q9NZV8 630 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 SH3BGRL2Q9UJC5 107 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 PADI1Q9ULC6 663 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 PLEKHM1Q9Y4G2 1056 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 CNTRLQ7Z7A1 2325 aa11.18□□□□□ -0.62
ATXN3-201ENST00000340660 A0A0G2JK05 382 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 PPM1DO15297 605 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ZW10O43264 779 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 AP1G1O43747 822 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ACSL4O60488 711 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 CRLF1O75462 422 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 PDGFRAP16234 1089 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 IGFBP2P18065 325 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 DDIT3P35638 169 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ARL4DP49703 201 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 SULT2A1Q06520 285 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 KRT32Q14532 448 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 PCOLCEQ15113 449 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ZNF174Q15697 407 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 BMP2KLQ5H9B9 411 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 FAM26FQ5R3K3 315 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 IGSF22Q8N9C0 903 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 BRD8Q9H0E9 1235 aa11.17□□□□□ -0.62
ATXN3-201ENST00000340660 SPATS2LQ9NUQ6 558 aaKnown RBP11.17□□□□□ -0.62
ATXN3-201ENST00000340660 KLQ9UEF7 1012 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms