RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 AQP12AQ8IXF9 295 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 FIBCD1Q8N539 461 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 TRIM8Q9BZR9 551 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 REXO4Q9GZR2 422 aaKnown RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 EPS8L2Q9H6S3 715 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 USE1Q9NZ43 259 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 RIMS3Q9UJD0 308 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 TCAF1Q9Y4C2 921 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 COL14A1Q05707 1796 aaKnown RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 LAMB1P07942 1786 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 ALDH1A2O94788 518 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 ADCYAP1R1P41586 468 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 MAGEA8P43361 318 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 FAM45BPQ6NSW5 357 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 LILRA2Q8N149 483 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 FAM45AQ8TCE6 357 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 HTRA1Q92743 480 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 HBEGFQ99075 208 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 WWOXQ9NZC7 414 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 HMX2A2RU54 273 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 YJEFN3A6XGL0 299 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 SIX3O95343 332 aaPredicted RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 CES1P23141 567 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 AARS2Q5JTZ9 985 aaKnown RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 MILR1Q7Z6M3 343 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 SMARCD1Q96GM5 515 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 ZFYVE19Q96K21 471 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 PCYT2Q99447 389 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 SH3GL1Q99961 368 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 AKTIPQ9H8T0 292 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 CD320Q9NPF0 282 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 TBCCD1Q9NVR7 557 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 SLC2A6Q9UGQ3 507 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 INVSQ9Y283 1065 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 CEPT1Q9Y6K0 416 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 KIAA1551Q9HCM1 1747 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 TOGARAM1Q9Y4F4 1720 aa12.47□□□□□ -0.41
RIOK3-201ENST00000339486 DDX60Q8IY21 1712 aaKnown RBP12.47□□□□□ -0.41
RIOK3-201ENST00000339486 ANXA6P08133 673 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 EFEMP1Q12805 493 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 EPS8Q12929 822 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 GRM2Q14416 872 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 TAZQ16635 292 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 RBM20Q5T481 1227 aaKnown RBP12.46□□□□□ -0.41
RIOK3-201ENST00000339486 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 METTL25Q8N6Q8 603 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 CEP44Q9C0F1 390 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 GIN1Q9NXP7 522 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.46□□□□□ -0.419e-6■□□□□ 10.6
RIOK3-201ENST00000339486 PNMA8BQ9ULN7 279 aaPredicted RBP12.46□□□□□ -0.41
RIOK3-201ENST00000339486 LOC100506127A0A0U1RQW1 187 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 C2orf81A6NN90 581 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 G3V2T6 193 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 ARPC2O15144 300 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 TSPAN1O60635 241 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 RSL1D1O76021 490 aaKnown RBP12.46□□□□□ -0.41
RIOK3-201ENST00000339486 THP07101 528 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 MSH3P20585 1137 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 MTHFRP42898 656 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 INCA1Q0VD86 236 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
RIOK3-201ENST00000339486 TREML2Q5T2D2 321 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 ARL10Q8N8L6 244 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 TRPV3Q8NET8 790 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 RAB2BQ8WUD1 216 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
RIOK3-201ENST00000339486 SFMBT1Q9UHJ3 866 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 COL4A1P02462 1669 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
RIOK3-201ENST00000339486 GRID2O43424 1007 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 STBD1O95210 358 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 ATG7O95352 703 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 CYP4B1P13584 511 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 ITGB6P18564 788 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 CYP2B6P20813 491 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 RGS4P49798 205 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 ZNF135P52742 658 aaPredicted RBP12.46□□□□□ -0.42
RIOK3-201ENST00000339486 PPP1R8Q12972 351 aaKnown RBP12.46□□□□□ -0.42
RIOK3-201ENST00000339486 TRAF3Q13114 568 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 TRNP1Q6NT89 227 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 OR8H2Q8N162 312 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 LEMD2Q8NC56 503 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 SETD9Q8NE22 299 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 SMOXQ9NWM0 555 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 PTBP2Q9UKA9 531 aaKnown RBP12.46□□□□□ -0.42
RIOK3-201ENST00000339486 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.42
RIOK3-201ENST00000339486 DDX60LQ5H9U9 1706 aaKnown RBP12.46□□□□□ -0.42
RIOK3-201ENST00000339486 SMIM28A0A1B0GU29 152 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 UBXN8O00124 270 aa12.46□□□□□ -0.42
RIOK3-201ENST00000339486 SOCS2O14508 198 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms